RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 EPS15P42566 896 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 FOXO4P98177 505 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 FAM161AQ3B820 660 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 EYA3Q99504 573 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 SRCIN1Q9C0H9 1055 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-209ENST00000484305 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-209ENST00000484305 GRM8O00222 908 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-209ENST00000484305 DOK7Q18PE1 504 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-209ENST00000484305 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 XDHP47989 1333 aa16.36■□□□□ 0.21
HDAC1-209ENST00000484305 SCN9AQ15858 1988 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 ECE2O60344 883 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 GMPSP49915 693 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-209ENST00000484305 TNIP1Q15025 636 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 EPHA10Q5JZY3 1008 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 DNAJC5GQ8N7S2 189 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 ZC3H12CQ9C0D7 883 aaKnown RBP16.35■□□□□ 0.21
HDAC1-209ENST00000484305 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-209ENST00000484305 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 PTPRCP08575 1304 aa16.35■□□□□ 0.21
HDAC1-209ENST00000484305 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
HDAC1-209ENST00000484305 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
HDAC1-209ENST00000484305 PSMD14O00487 310 aa16.33■□□□□ 0.2
HDAC1-209ENST00000484305 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
HDAC1-209ENST00000484305 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
HDAC1-209ENST00000484305 LMBR1LQ6UX01 489 aa16.33■□□□□ 0.2
HDAC1-209ENST00000484305 SMC4Q9NTJ3 1288 aa16.33■□□□□ 0.2
HDAC1-209ENST00000484305 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
HDAC1-209ENST00000484305 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
HDAC1-209ENST00000484305 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
HDAC1-209ENST00000484305 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
HDAC1-209ENST00000484305 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
HDAC1-209ENST00000484305 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
HDAC1-209ENST00000484305 UTYO14607 1347 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 PASKQ96RG2 1323 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 CCT4P50991 539 aaKnown RBP16.31■□□□□ 0.2
HDAC1-209ENST00000484305 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
HDAC1-209ENST00000484305 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-209ENST00000484305 KAZALD1Q96I82 304 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-209ENST00000484305 PSME4Q14997 1843 aa16.31■□□□□ 0.2
HDAC1-209ENST00000484305 G3V3G9 751 aa16.3■□□□□ 0.2
HDAC1-209ENST00000484305 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
HDAC1-209ENST00000484305 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
HDAC1-209ENST00000484305 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-209ENST00000484305 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
HDAC1-209ENST00000484305 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
HDAC1-209ENST00000484305 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
HDAC1-209ENST00000484305 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC1-209ENST00000484305 CHRNDQ07001 517 aa16.29■□□□□ 0.2
HDAC1-209ENST00000484305 MICALL2Q8IY33 904 aa16.29■□□□□ 0.2
HDAC1-209ENST00000484305 NOB1Q9ULX3 412 aaKnown RBP16.29■□□□□ 0.2
HDAC1-209ENST00000484305 MED23Q9ULK4 1368 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
HDAC1-209ENST00000484305 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
HDAC1-209ENST00000484305 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
HDAC1-209ENST00000484305 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
HDAC1-209ENST00000484305 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 DPF2Q92785 391 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 LEMD3Q9Y2U8 911 aa16.28■□□□□ 0.2
HDAC1-209ENST00000484305 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
HDAC1-209ENST00000484305 KLRK1P26718 216 aa16.27■□□□□ 0.2
HDAC1-209ENST00000484305 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
HDAC1-209ENST00000484305 TRPM4Q8TD43 1214 aa16.27■□□□□ 0.2
HDAC1-209ENST00000484305 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
HDAC1-209ENST00000484305 H7C1D1 291 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 SNAP23O00161 211 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 TAF5LO75529 589 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
HDAC1-209ENST00000484305 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.191e-10■□□□□ 10.1
HDAC1-209ENST00000484305 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 PODNQ7Z5L7 613 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
HDAC1-209ENST00000484305 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
HDAC1-209ENST00000484305 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-209ENST00000484305 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
HDAC1-209ENST00000484305 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
HDAC1-209ENST00000484305 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
HDAC1-209ENST00000484305 POLR2AP24928 1970 aaKnown RBP16.25■□□□□ 0.19
HDAC1-209ENST00000484305 TRPM7Q96QT4 1865 aa16.25■□□□□ 0.19
HDAC1-209ENST00000484305 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 EGFRP00533 1210 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 KCNJ4P48050 445 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms