RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
NUP50-215ENST00000484186 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
NUP50-215ENST00000484186 PGAP2Q9UHJ9 254 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
NUP50-215ENST00000484186 H7C1W4 665 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 TRAF5O00463 557 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 UFL1O94874 794 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 HIRAP54198 1017 aaPredicted RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 FLIIQ13045 1269 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
NUP50-215ENST00000484186 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
NUP50-215ENST00000484186 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 G3V3G9 751 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 RPS12P25398 132 aaKnown RBP12.06□□□□□ -0.48
NUP50-215ENST00000484186 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
NUP50-215ENST00000484186 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 CST9Q5W186 159 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 XDHP47989 1333 aa12.06□□□□□ -0.48
NUP50-215ENST00000484186 VIL1P09327 827 aaKnown RBP12.05□□□□□ -0.48
NUP50-215ENST00000484186 ATP2B4P23634 1241 aa12.05□□□□□ -0.48
NUP50-215ENST00000484186 GCKRQ14397 625 aa12.05□□□□□ -0.48
NUP50-215ENST00000484186 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
NUP50-215ENST00000484186 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
NUP50-215ENST00000484186 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
NUP50-215ENST00000484186 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
NUP50-215ENST00000484186 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
NUP50-215ENST00000484186 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
NUP50-215ENST00000484186 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
NUP50-215ENST00000484186 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 SAMD7Q7Z3H4 446 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 PLA2G12BQ9BX93 195 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 GREM2Q9H772 168 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 TLL2Q9Y6L7 1015 aa12.04□□□□□ -0.48
NUP50-215ENST00000484186 FOXN1O15353 648 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
NUP50-215ENST00000484186 CASP7P55210 303 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
NUP50-215ENST00000484186 TNS4Q8IZW8 715 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 PCNTO95613 3336 aa12.03□□□□□ -0.48
NUP50-215ENST00000484186 CSF1RP07333 972 aa12.02□□□□□ -0.49
NUP50-215ENST00000484186 IGHMBP2P38935 993 aaKnown RBP12.02□□□□□ -0.49
NUP50-215ENST00000484186 ECE1P42892 770 aa12.02□□□□□ -0.49
NUP50-215ENST00000484186 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
NUP50-215ENST00000484186 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
NUP50-215ENST00000484186 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
NUP50-215ENST00000484186 PODNQ7Z5L7 613 aa12.02□□□□□ -0.49
NUP50-215ENST00000484186 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
NUP50-215ENST00000484186 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
NUP50-215ENST00000484186 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
NUP50-215ENST00000484186 EGFRP00533 1210 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 ITGA6P23229 1130 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
NUP50-215ENST00000484186 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
NUP50-215ENST00000484186 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
NUP50-215ENST00000484186 SAPCD2Q86UD0 394 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
NUP50-215ENST00000484186 LEMD3Q9Y2U8 911 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
NUP50-215ENST00000484186 USP17L3A6NCW0 530 aa12□□□□□ -0.49
NUP50-215ENST00000484186 USP17L4A6NCW7 530 aa12□□□□□ -0.49
NUP50-215ENST00000484186 F6X3S4 739 aa12□□□□□ -0.49
NUP50-215ENST00000484186 GRM1Q13255 1194 aa12□□□□□ -0.49
NUP50-215ENST00000484186 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
NUP50-215ENST00000484186 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
NUP50-215ENST00000484186 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
NUP50-215ENST00000484186 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
NUP50-215ENST00000484186 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
NUP50-215ENST00000484186 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
NUP50-215ENST00000484186 ZNF408Q9H9D4 720 aa12□□□□□ -0.49
NUP50-215ENST00000484186 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
NUP50-215ENST00000484186 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
NUP50-215ENST00000484186 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 GMLQ99445 158 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 MYH3P11055 1940 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
NUP50-215ENST00000484186 ZNF609O15014 1411 aa11.98□□□□□ -0.49
NUP50-215ENST00000484186 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
NUP50-215ENST00000484186 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
NUP50-215ENST00000484186 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
NUP50-215ENST00000484186 MAP2K2P36507 400 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms