RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SNRKQ9NRH2 765 aa31.76■■■□□ 2.68
SHOX2-204ENST00000483851 PDE8BO95263 885 aa31.76■■■□□ 2.67
SHOX2-204ENST00000483851 ERFEQ4G0M1 354 aa31.76■■■□□ 2.67
SHOX2-204ENST00000483851 FSD1Q9BTV5 496 aa31.76■■■□□ 2.67
SHOX2-204ENST00000483851 ATP2B3Q16720 1220 aa31.75■■■□□ 2.67
SHOX2-204ENST00000483851 TPTE2Q6XPS3 522 aa31.75■■■□□ 2.67
SHOX2-204ENST00000483851 CWC27Q6UX04 472 aaKnown RBP31.74■■■□□ 2.67
SHOX2-204ENST00000483851 KIAA1211Q6ZU35 1233 aa31.74■■■□□ 2.67
SHOX2-204ENST00000483851 AMIGO3Q86WK7 504 aa31.74■■■□□ 2.67
SHOX2-204ENST00000483851 HSCBQ8IWL3 235 aa31.74■■■□□ 2.67
SHOX2-204ENST00000483851 CDC5LQ99459 802 aaKnown RBP31.74■■■□□ 2.67
SHOX2-204ENST00000483851 MPHOSPH8Q99549 860 aa31.74■■■□□ 2.67
SHOX2-204ENST00000483851 GTF2E1P29083 439 aaPredicted RBP31.74■■■□□ 2.67
SHOX2-204ENST00000483851 IGHMBP2P38935 993 aaKnown RBP31.74■■■□□ 2.67
SHOX2-204ENST00000483851 XAGE2Q96GT9 111 aa31.74■■■□□ 2.67
SHOX2-204ENST00000483851 NBPF5PQ86XG9 351 aaPredicted RBP31.73■■■□□ 2.67
SHOX2-204ENST00000483851 ANTXR1Q9H6X2 564 aa31.73■■■□□ 2.67
SHOX2-204ENST00000483851 TXNRD1Q16881 649 aa31.72■■■□□ 2.67
SHOX2-204ENST00000483851 BICDL1Q6ZP65 573 aa31.72■■■□□ 2.67
SHOX2-204ENST00000483851 SMIM5Q71RC9 77 aa31.72■■■□□ 2.67
SHOX2-204ENST00000483851 ZNF512BQ96KM6 892 aaPredicted RBP31.72■■■□□ 2.67
SHOX2-204ENST00000483851 GORABQ5T7V8 394 aa31.72■■■□□ 2.67
SHOX2-204ENST00000483851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.71■■■□□ 2.67
SHOX2-204ENST00000483851 ILDR1Q86SU0 546 aaPredicted RBP31.71■■■□□ 2.67
SHOX2-204ENST00000483851 IL25Q9H293 177 aa31.71■■■□□ 2.67
SHOX2-204ENST00000483851 CARMIL3Q8ND23 1372 aa31.7■■■□□ 2.67
SHOX2-204ENST00000483851 IFIT1P09914 478 aaKnown RBP31.7■■■□□ 2.67
SHOX2-204ENST00000483851 KBTBD3Q8NAB2 608 aa31.7■■■□□ 2.67
SHOX2-204ENST00000483851 PHF14O94880 888 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 PUM3Q15397 648 aaKnown RBP31.69■■■□□ 2.66
SHOX2-204ENST00000483851 LSG1Q9H089 658 aaKnown RBP31.69■■■□□ 2.66
SHOX2-204ENST00000483851 SEC31BQ9NQW1 1179 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 CASZ1Q86V15 1759 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 ARAP2Q8WZ64 1704 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 LPIN2Q92539 896 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 DNAJC2Q99543 621 aaKnown RBP31.69■■■□□ 2.66
SHOX2-204ENST00000483851 PAG1Q9NWQ8 432 aa31.69■■■□□ 2.66
SHOX2-204ENST00000483851 HSPA4P34932 840 aa31.68■■■□□ 2.66
SHOX2-204ENST00000483851 TTC39AQ5SRH9 613 aa31.68■■■□□ 2.66
SHOX2-204ENST00000483851 NLRP3Q96P20 1036 aa31.68■■■□□ 2.66
SHOX2-204ENST00000483851 FGFR2P21802 821 aa31.67■■■□□ 2.66
SHOX2-204ENST00000483851 PROM2Q8N271 834 aa31.67■■■□□ 2.66
SHOX2-204ENST00000483851 NMIQ13287 307 aaPredicted RBP31.67■■■□□ 2.66
SHOX2-204ENST00000483851 RGPD3A6NKT7 1758 aaPredicted RBP31.66■■■□□ 2.66
SHOX2-204ENST00000483851 RGPD4Q7Z3J3 1758 aa31.66■■■□□ 2.66
SHOX2-204ENST00000483851 ADORA1P30542 326 aa31.65■■■□□ 2.66
SHOX2-204ENST00000483851 LRRFIP1Q32MZ4 808 aaKnown RBP31.65■■■□□ 2.66
SHOX2-204ENST00000483851 ANKRD18AQ8IVF6 992 aa31.65■■■□□ 2.66
SHOX2-204ENST00000483851 MED23Q9ULK4 1368 aa31.64■■■□□ 2.66
SHOX2-204ENST00000483851 NFIXQ14938 502 aa31.63■■■□□ 2.65
SHOX2-204ENST00000483851 EDC3Q96F86 508 aaKnown RBP31.63■■■□□ 2.65
SHOX2-204ENST00000483851 RGS17Q9UGC6 210 aaPredicted RBP31.63■■■□□ 2.65
SHOX2-204ENST00000483851 ST18O60284 1047 aa31.63■■■□□ 2.65
SHOX2-204ENST00000483851 APBA3O96018 575 aa31.63■■■□□ 2.65
SHOX2-204ENST00000483851 SLC5A1P13866 664 aa31.63■■■□□ 2.65
SHOX2-204ENST00000483851 FAM227BQ96M60 508 aa31.63■■■□□ 2.65
SHOX2-204ENST00000483851 BSDC1Q9NW68 430 aaPredicted RBP31.63■■■□□ 2.65
SHOX2-204ENST00000483851 GOLIM4O00461 696 aa31.62■■■□□ 2.65
SHOX2-204ENST00000483851 DDX46Q7L014 1031 aaKnown RBP31.62■■■□□ 2.65
SHOX2-204ENST00000483851 UQCRFS1P1P0C7P4 283 aa31.61■■■□□ 2.65
SHOX2-204ENST00000483851 GYS1P13807 737 aa31.61■■■□□ 2.65
SHOX2-204ENST00000483851 CCDC171Q6TFL3 1326 aa31.61■■■□□ 2.65
SHOX2-204ENST00000483851 A0A0D9SFI3 127 aa31.61■■■□□ 2.65
SHOX2-204ENST00000483851 C3orf67Q6ZVT6 689 aa31.61■■■□□ 2.65
SHOX2-204ENST00000483851 K7ELQ4 463 aaPredicted RBP31.6■■■□□ 2.65
SHOX2-204ENST00000483851 TNS1Q9HBL0 1735 aaKnown RBP31.59■■■□□ 2.65
SHOX2-204ENST00000483851 FRAT2O75474 233 aaPredicted RBP31.59■■■□□ 2.65
SHOX2-204ENST00000483851 ARID4AP29374 1257 aaPredicted RBP31.59■■■□□ 2.65
SHOX2-204ENST00000483851 MAP4K1Q92918 833 aa31.59■■■□□ 2.65
SHOX2-204ENST00000483851 HELLSQ9NRZ9 838 aa31.59■■■□□ 2.65
SHOX2-204ENST00000483851 ZFYP08048 801 aaPredicted RBP31.58■■■□□ 2.65
SHOX2-204ENST00000483851 CNBD1Q8NA66 436 aa31.58■■■□□ 2.65
SHOX2-204ENST00000483851 FLAD1Q8NFF5 587 aa31.58■■■□□ 2.65
SHOX2-204ENST00000483851 KCNB2Q92953 911 aa31.58■■■□□ 2.65
SHOX2-204ENST00000483851 NDUFB9Q9Y6M9 179 aa31.58■■■□□ 2.65
SHOX2-204ENST00000483851 TM4SF1P30408 202 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 CHRNDQ07001 517 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 MCMDC2Q4G0Z9 681 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 SLKQ9H2G2 1235 aaPredicted RBP31.57■■■□□ 2.64
SHOX2-204ENST00000483851 PALD1Q9ULE6 856 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 AKAP11Q9UKA4 1901 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 MCM2P49736 904 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 CCDC102BQ68D86 513 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 POTEAQ6S8J7 498 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 AKT1S1Q96B36 256 aa31.57■■■□□ 2.64
SHOX2-204ENST00000483851 NPHP1O15259 732 aa31.56■■■□□ 2.64
SHOX2-204ENST00000483851 TTF1Q15361 905 aaPredicted RBP31.56■■■□□ 2.64
SHOX2-204ENST00000483851 A0A1B0GUL6 1792 aa31.55■■■□□ 2.64
SHOX2-204ENST00000483851 RPS8P62241 208 aaKnown RBP31.55■■■□□ 2.64
SHOX2-204ENST00000483851 FKBP4Q02790 459 aaKnown RBP eCLIP31.55■■■□□ 2.64
SHOX2-204ENST00000483851 PTH1RQ03431 593 aa31.55■■■□□ 2.64
SHOX2-204ENST00000483851 HELBQ8NG08 1087 aaPredicted RBP31.55■■■□□ 2.64
SHOX2-204ENST00000483851 EP400Q96L91 3159 aa31.54■■■□□ 2.64
SHOX2-204ENST00000483851 RNF113AO15541 343 aaKnown RBP31.54■■■□□ 2.64
SHOX2-204ENST00000483851 CD2BP2O95400 341 aaKnown RBP31.54■■■□□ 2.64
SHOX2-204ENST00000483851 UBE4AQ14139 1066 aa31.54■■■□□ 2.64
SHOX2-204ENST00000483851 NECTIN1Q15223 517 aa31.54■■■□□ 2.64
SHOX2-204ENST00000483851 ZMYM1Q5SVZ6 1142 aa31.53■■■□□ 2.64
SHOX2-204ENST00000483851 MCAMP43121 646 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 SCARF1Q14162 830 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms