RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 DOK7Q18PE1 504 aa23.65■■□□□ 1.38
TNFSF13-208ENST00000483039 VIL1P09327 827 aaKnown RBP23.64■■□□□ 1.37
TNFSF13-208ENST00000483039 PNNQ9H307 717 aaKnown RBP23.64■■□□□ 1.37
TNFSF13-208ENST00000483039 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
TNFSF13-208ENST00000483039 HDAC9Q9UKV0 1011 aa23.64■■□□□ 1.37
TNFSF13-208ENST00000483039 SCN9AQ15858 1988 aa23.63■■□□□ 1.37
TNFSF13-208ENST00000483039 ASTN2O75129 1339 aaPredicted RBP23.63■■□□□ 1.37
TNFSF13-208ENST00000483039 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
TNFSF13-208ENST00000483039 PAPPA2Q9BXP8 1791 aa23.62■■□□□ 1.37
TNFSF13-208ENST00000483039 ANGEL2Q5VTE6 544 aaKnown RBP23.61■■□□□ 1.37
TNFSF13-208ENST00000483039 TBC1D16Q8TBP0 767 aa23.61■■□□□ 1.37
TNFSF13-208ENST00000483039 ZNF296Q8WUU4 475 aaPredicted RBP23.61■■□□□ 1.37
TNFSF13-208ENST00000483039 ZC3H12CQ9C0D7 883 aaKnown RBP23.61■■□□□ 1.37
TNFSF13-208ENST00000483039 ZNF280AP59817 542 aaPredicted RBP23.6■■□□□ 1.37
TNFSF13-208ENST00000483039 SCARF1Q14162 830 aa23.6■■□□□ 1.37
TNFSF13-208ENST00000483039 NECTIN2Q92692 538 aa23.6■■□□□ 1.37
TNFSF13-208ENST00000483039 GCC1Q96CN9 775 aa23.6■■□□□ 1.37
TNFSF13-208ENST00000483039 ZNF609O15014 1411 aa23.59■■□□□ 1.37
TNFSF13-208ENST00000483039 AGBL3Q8NEM8 1001 aa23.59■■□□□ 1.37
TNFSF13-208ENST00000483039 FAM89AQ96GI7 184 aa23.59■■□□□ 1.37
TNFSF13-208ENST00000483039 TBC1D8O95759 1140 aa23.58■■□□□ 1.37
TNFSF13-208ENST00000483039 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.37
TNFSF13-208ENST00000483039 NOM1Q5C9Z4 860 aaKnown RBP23.58■■□□□ 1.37
TNFSF13-208ENST00000483039 ZNF428Q96B54 188 aa23.58■■□□□ 1.37
TNFSF13-208ENST00000483039 PODXL2Q9NZ53 605 aa23.58■■□□□ 1.37
TNFSF13-208ENST00000483039 PITPNM2Q9BZ72 1349 aa23.58■■□□□ 1.36
TNFSF13-208ENST00000483039 COL4A1P02462 1669 aa23.57■■□□□ 1.36
TNFSF13-208ENST00000483039 G3V3G9 751 aa23.57■■□□□ 1.36
TNFSF13-208ENST00000483039 DCAF8Q5TAQ9 597 aa23.57■■□□□ 1.36
TNFSF13-208ENST00000483039 PLBD2Q8NHP8 589 aa23.57■■□□□ 1.36
TNFSF13-208ENST00000483039 ISCA1Q9BUE6 129 aa23.57■■□□□ 1.36
TNFSF13-208ENST00000483039 RSBN1LQ6PCB5 846 aaPredicted RBP23.56■■□□□ 1.36
TNFSF13-208ENST00000483039 FBXO46Q6PJ61 603 aaPredicted RBP23.56■■□□□ 1.36
TNFSF13-208ENST00000483039 PSME4Q14997 1843 aa23.55■■□□□ 1.36
TNFSF13-208ENST00000483039 GPR25O00155 361 aa23.55■■□□□ 1.36
TNFSF13-208ENST00000483039 TM4SF4P48230 202 aa23.55■■□□□ 1.36
TNFSF13-208ENST00000483039 RIPK4P57078 832 aa23.54■■□□□ 1.36
TNFSF13-208ENST00000483039 ANKRD13DQ6ZTN6 518 aa23.54■■□□□ 1.36
TNFSF13-208ENST00000483039 UFL1O94874 794 aa23.53■■□□□ 1.36
TNFSF13-208ENST00000483039 MOB2Q70IA6 237 aa23.53■■□□□ 1.36
TNFSF13-208ENST00000483039 GMLQ99445 158 aa23.53■■□□□ 1.36
TNFSF13-208ENST00000483039 MYOZ2Q9NPC6 264 aa23.53■■□□□ 1.36
TNFSF13-208ENST00000483039 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 UBE2Q2LH0YL09 131 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 USP17L8P0C7I0 530 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 CHPF2Q9P2E5 772 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 ANKIB1Q9P2G1 1089 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 GGA1Q9UJY5 639 aa23.52■■□□□ 1.36
TNFSF13-208ENST00000483039 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
TNFSF13-208ENST00000483039 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
TNFSF13-208ENST00000483039 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
TNFSF13-208ENST00000483039 TRIM28Q13263 835 aaKnown RBP23.5■■□□□ 1.35
TNFSF13-208ENST00000483039 CFHR5Q9BXR6 569 aa23.5■■□□□ 1.35
TNFSF13-208ENST00000483039 FKTNO75072 461 aa23.49■■□□□ 1.35
TNFSF13-208ENST00000483039 SREBF2Q12772 1141 aa23.48■■□□□ 1.35
TNFSF13-208ENST00000483039 TTLL12Q14166 644 aaPredicted RBP23.48■■□□□ 1.35
TNFSF13-208ENST00000483039 KRT24Q2M2I5 525 aa23.48■■□□□ 1.35
TNFSF13-208ENST00000483039 HABP4Q5JVS0 413 aaKnown RBP23.48■■□□□ 1.35
TNFSF13-208ENST00000483039 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
TNFSF13-208ENST00000483039 USP17L3A6NCW0 530 aa23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 USP17L4A6NCW7 530 aa23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 HSP90B1P14625 803 aaKnown RBP23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 HDGFL1Q5TGJ6 251 aa23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 USP17L1Q7RTZ2 530 aa23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 PODNQ7Z5L7 613 aa23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 DBF4Q9UBU7 674 aaPredicted RBP23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 SCAF8Q9UPN6 1271 aaKnown RBP23.47■■□□□ 1.35
TNFSF13-208ENST00000483039 CHL1O00533 1208 aa23.46■■□□□ 1.35
TNFSF13-208ENST00000483039 NF2P35240 595 aa23.46■■□□□ 1.35
TNFSF13-208ENST00000483039 TMPOP42166 694 aaKnown RBP23.46■■□□□ 1.35
TNFSF13-208ENST00000483039 PRAMEF18Q5VWM3 479 aa23.46■■□□□ 1.35
TNFSF13-208ENST00000483039 HOXB7P09629 217 aa23.45■■□□□ 1.34
TNFSF13-208ENST00000483039 ZBTB38Q8NAP3 1195 aaPredicted RBP23.45■■□□□ 1.34
TNFSF13-208ENST00000483039 XDHP47989 1333 aa23.44■■□□□ 1.34
TNFSF13-208ENST00000483039 MKRN3Q13064 507 aaKnown RBP23.44■■□□□ 1.34
TNFSF13-208ENST00000483039 NBPF9Q3BBW0 867 aa23.44■■□□□ 1.34
TNFSF13-208ENST00000483039 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
TNFSF13-208ENST00000483039 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
TNFSF13-208ENST00000483039 CCDC152Q4G0S7 254 aa23.43■■□□□ 1.34
TNFSF13-208ENST00000483039 R3HDMLQ9H3Y0 253 aa23.43■■□□□ 1.34
TNFSF13-208ENST00000483039 ALDH1A1P00352 501 aa23.42■■□□□ 1.34
TNFSF13-208ENST00000483039 INTS3Q68E01 1043 aaKnown RBP23.42■■□□□ 1.34
TNFSF13-208ENST00000483039 ARMC9Q7Z3E5 817 aa23.41■■□□□ 1.34
TNFSF13-208ENST00000483039 OGFOD1Q8N543 542 aa23.41■■□□□ 1.34
TNFSF13-208ENST00000483039 WNT10BO00744 389 aa23.4■■□□□ 1.34
TNFSF13-208ENST00000483039 PTPN12Q05209 780 aaKnown RBP23.4■■□□□ 1.34
TNFSF13-208ENST00000483039 PDE8AO60658 829 aa23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 SPRYD7Q5W111 196 aa23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 RIC3Q7Z5B4 369 aa23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
TNFSF13-208ENST00000483039 MYO3BQ8WXR4 1341 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 POTEFA5A3E0 1075 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 PCCAP05165 728 aaPredicted RBP23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 MMP14P50281 582 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 INHBEP58166 350 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 DACT2Q5SW24 774 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 LDLRAD1Q5T700 205 aa23.38■■□□□ 1.33
TNFSF13-208ENST00000483039 KIAA0100Q14667 2235 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms