RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 DCAF8Q5TAQ9 597 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 C9orf131Q5VYM1 1079 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
SHANK2-216ENST00000482659 MEIS3Q99687 375 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 BICC1Q9H694 974 aaKnown RBP5.67□□□□□ -1.5
SHANK2-216ENST00000482659 SEC31BQ9NQW1 1179 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 CNNM1Q9NRU3 951 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 RNF181Q9P0P0 153 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 GGA1Q9UJY5 639 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 C4AP0C0L4 1744 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 UBR3Q6ZT12 1888 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 C6orf229H3BNL8 230 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 NFKBIEO00221 500 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 SRGAP3O43295 1099 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 CIAO1O76071 339 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 YY1P25490 414 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 IARSP41252 1262 aaKnown RBP5.66□□□□□ -1.5
SHANK2-216ENST00000482659 KCNJ4P48050 445 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 EIF6P56537 245 aaKnown RBP5.66□□□□□ -1.5
SHANK2-216ENST00000482659 HSP90AB4PQ58FF6 505 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 RPAP2Q8IXW5 612 aaPredicted RBP5.66□□□□□ -1.5
SHANK2-216ENST00000482659 NIM1KQ8IY84 436 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 LARGE2Q8N3Y3 721 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 XDHP47989 1333 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 MROH5Q6ZUA9 1318 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 KDM2BQ8NHM5 1336 aa5.66□□□□□ -1.5
SHANK2-216ENST00000482659 LAMB4A4D0S4 1761 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 TAF1LQ8IZX4 1826 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 PPIP5K2O43314 1243 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 PLIN1O60240 522 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 HMMRO75330 724 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
SHANK2-216ENST00000482659 RRP1P56182 461 aaKnown RBP5.65□□□□□ -1.5
SHANK2-216ENST00000482659 GPSM2P81274 684 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 ATP8B2P98198 1209 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 KIAA2012Q0VF49 1180 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 TNIP1Q15025 636 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 CAVIN4Q5BKX8 364 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 METTL24Q5JXM2 366 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 PODNQ7Z5L7 613 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 RASEFQ8IZ41 740 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 ANKRD44Q8N8A2 993 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 TBC1D16Q8TBP0 767 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 PANK1Q8TE04 598 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 COA1Q9GZY4 146 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 COPRSQ9NQ92 184 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 ZNF277Q9NRM2 450 aaPredicted RBP5.65□□□□□ -1.5
SHANK2-216ENST00000482659 ZNRF3Q9ULT6 936 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 AKAP2Q9Y2D5 859 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 COG6Q9Y2V7 657 aa5.65□□□□□ -1.5
SHANK2-216ENST00000482659 LRRFIP2Q9Y608 721 aaKnown RBP5.65□□□□□ -1.5
SHANK2-216ENST00000482659 ZNF804BA4D1E1 1349 aa5.65□□□□□ -1.51
SHANK2-216ENST00000482659 SCN7AQ01118 1682 aa5.65□□□□□ -1.51
SHANK2-216ENST00000482659 DLG5Q8TDM6 1919 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 IQCA1LA6NCM1 817 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 GLTPD2A6NH11 291 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 FZD9O00144 591 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 EYA2O00167 538 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 UFL1O94874 794 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 PDE8BO95263 885 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 IFIT1P09914 478 aaKnown RBP5.64□□□□□ -1.51
SHANK2-216ENST00000482659 RLBP1P12271 317 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 MMP14P50281 582 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 RASSF7Q02833 373 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 CHRNDQ07001 517 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 G3BP1Q13283 466 aaKnown RBP eCLIP5.64□□□□□ -1.51
SHANK2-216ENST00000482659 UBE4AQ14139 1066 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 GSE1Q14687 1217 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 C15orf52Q6ZUT6 534 aaKnown RBP5.64□□□□□ -1.51
SHANK2-216ENST00000482659 ERC1Q8IUD2 1116 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 FAM212AQ96EL1 285 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 ZBTB40Q9NUA8 1239 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 CEP126Q9P2H0 1117 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 POLLQ9UGP5 575 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 CIZ1Q9ULV3 898 aaPredicted RBP5.64□□□□□ -1.51
SHANK2-216ENST00000482659 RIPOR2Q9Y4F9 1068 aa5.64□□□□□ -1.51
SHANK2-216ENST00000482659 MYH14Q7Z406 1995 aaKnown RBP5.64□□□□□ -1.51
SHANK2-216ENST00000482659 KAT6BQ8WYB5 2073 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 SURF6O75683 361 aaKnown RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 VEGFAP15692 232 aaPredicted RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 RFX5P48382 616 aaPredicted RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 PTPN12Q05209 780 aaKnown RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 PUM3Q15397 648 aaKnown RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 AOC3Q16853 763 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 OLFM4Q6UX06 510 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 ZNF804AQ7Z570 1209 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 GPC2Q8N158 579 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 SSH3Q8TE77 659 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 LPIN2Q92539 896 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 ZNF594Q96JF6 807 aaPredicted RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 GPBP1L1Q9HC44 474 aaPredicted RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 TNNQ9UQP3 1299 aa5.63□□□□□ -1.51
SHANK2-216ENST00000482659 NOP58Q9Y2X3 529 aaKnown RBP5.63□□□□□ -1.51
SHANK2-216ENST00000482659 COL24A1Q17RW2 1714 aa5.62□□□□□ -1.51
SHANK2-216ENST00000482659 RIMBP2O15034 1052 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms