RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 CAPN15O75808 1086 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 EYA3Q99504 573 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 GREM2Q9H772 168 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-207ENST00000482162 PSMD14O00487 310 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 RPS12P25398 132 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 CST9Q5W186 159 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 ZNF609O15014 1411 aa12.43□□□□□ -0.42
TMEM39A-207ENST00000482162 XDHP47989 1333 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 GPR101Q96P66 508 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 DBNDD1Q9H9R9 158 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-207ENST00000482162 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 ECE2O60344 883 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 UFL1O94874 794 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 VEGFBP49765 207 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 TRPM4Q8TD43 1214 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 GMLQ99445 158 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
TMEM39A-207ENST00000482162 PCNTO95613 3336 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 H7C1D1 291 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 TRAF5O00463 557 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 FOXO4P98177 505 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
TMEM39A-207ENST00000482162 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 F6X3S4 739 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 EGFRP00533 1210 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 ITGA6P23229 1130 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
TMEM39A-207ENST00000482162 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 SLFN5Q08AF3 891 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 TNS4Q8IZW8 715 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 HHIPL1Q96JK4 782 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 GLIS2Q9BZE0 524 aaPredicted RBP12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 MYH3P11055 1940 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
TMEM39A-207ENST00000482162 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 E9PSI1 815 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 GRM8O00222 908 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 C15orf52Q6ZUT6 534 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 UTYO14607 1347 aa12.37□□□□□ -0.43
TMEM39A-207ENST00000482162 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-207ENST00000482162 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
TMEM39A-207ENST00000482162 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 FOXN1O15353 648 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 MMP14P50281 582 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms