RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
PTK7-213ENST00000481273 SCRN1Q12765 414 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 TFCP2Q12800 502 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 TEX35Q5T0J7 233 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 PLA2G4DQ86XP0 818 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 TDRD7Q8NHU6 1098 aaKnown RBP12.75□□□□□ -0.37
PTK7-213ENST00000481273 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 SEC31AO94979 1220 aaKnown RBP12.75□□□□□ -0.37
PTK7-213ENST00000481273 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
PTK7-213ENST00000481273 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
PTK7-213ENST00000481273 AOX1Q06278 1338 aa12.75□□□□□ -0.37
PTK7-213ENST00000481273 HIP1O00291 1037 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 GYS2P54840 703 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 TIMM10P62072 90 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 PSME1Q06323 249 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
PTK7-213ENST00000481273 CYP21A2P08686 494 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 LTKP29376 864 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 TPM4P67936 248 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
PTK7-213ENST00000481273 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
PTK7-213ENST00000481273 APPP05067 770 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 TERF2Q15554 542 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 SPECC1Q5M775 1068 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
PTK7-213ENST00000481273 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
PTK7-213ENST00000481273 TAF5LO75529 589 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 TMCO3Q6UWJ1 677 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
PTK7-213ENST00000481273 SLFN14P0C7P3 912 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 NDUFA8P51970 172 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
PTK7-213ENST00000481273 RESTQ13127 1097 aa12.72□□□□□ -0.37
PTK7-213ENST00000481273 RIMS1Q86UR5 1692 aaKnown RBP12.71□□□□□ -0.37
PTK7-213ENST00000481273 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 ERO1AQ96HE7 468 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 IQCB1Q15051 598 aa12.71□□□□□ -0.37
PTK7-213ENST00000481273 A0A0G2JS52 829 aa12.71□□□□□ -0.38
PTK7-213ENST00000481273 KARSQ15046 597 aaKnown RBP12.71□□□□□ -0.38
PTK7-213ENST00000481273 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.38
PTK7-213ENST00000481273 C8orf76Q96K31 380 aa12.71□□□□□ -0.38
PTK7-213ENST00000481273 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.38
PTK7-213ENST00000481273 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.38
PTK7-213ENST00000481273 CLIC4Q9Y696 253 aa12.71□□□□□ -0.38
PTK7-213ENST00000481273 SBNO1A3KN83 1393 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 A0A087WZG4 1122 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
PTK7-213ENST00000481273 KRT32Q14532 448 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.7□□□□□ -0.38
PTK7-213ENST00000481273 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 PCDHA7Q9UN72 937 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 PREX1Q8TCU6 1659 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 ELP1O95163 1332 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 GNG11P61952 73 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
PTK7-213ENST00000481273 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
PTK7-213ENST00000481273 CLCN6P51797 869 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 BMS1Q14692 1282 aaKnown RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 TRIM34Q9BYJ4 488 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 ARGLU1Q9NWB6 273 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 UBASH3AP57075 661 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 CCZ1BP86790 482 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 PPP1R13BQ96KQ4 1090 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
PTK7-213ENST00000481273 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
PTK7-213ENST00000481273 PHACTR2O75167 634 aa12.68□□□□□ -0.38
PTK7-213ENST00000481273 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
PTK7-213ENST00000481273 STOX1Q6ZVD7 989 aa12.68□□□□□ -0.38
PTK7-213ENST00000481273 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
PTK7-213ENST00000481273 LINS1Q8NG48 757 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms