RNA–Protein interactions for RNA: ENST00000479692.2

CDKN2A-205, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 5 BASIC

Gene CDKN2A, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-205ENST00000479692 C21orf2O43822 256 aa25.63■■□□□ 1.69
CDKN2A-205ENST00000479692 RFX5P48382 616 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-205ENST00000479692 CCDC93Q567U6 631 aa25.63■■□□□ 1.69
CDKN2A-205ENST00000479692 PA2G4Q9UQ80 394 aaKnown RBP25.63■■□□□ 1.69
CDKN2A-205ENST00000479692 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
CDKN2A-205ENST00000479692 GPR162Q16538 588 aa25.62■■□□□ 1.69
CDKN2A-205ENST00000479692 RTKN2Q8IZC4 609 aa25.62■■□□□ 1.69
CDKN2A-205ENST00000479692 CEP126Q9P2H0 1117 aa25.62■■□□□ 1.69
CDKN2A-205ENST00000479692 COL11A2P13942 1736 aaPredicted RBP25.61■■□□□ 1.69
CDKN2A-205ENST00000479692 DPP8Q6V1X1 898 aaPredicted RBP25.61■■□□□ 1.69
CDKN2A-205ENST00000479692 SIRT2Q8IXJ6 389 aa25.61■■□□□ 1.69
CDKN2A-205ENST00000479692 CCDC136Q96JN2 1154 aa25.61■■□□□ 1.69
CDKN2A-205ENST00000479692 NSFL1CQ9UNZ2 370 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-205ENST00000479692 RAB11FIP3O75154 756 aa25.6■■□□□ 1.69
CDKN2A-205ENST00000479692 MPNDQ8N594 471 aa25.6■■□□□ 1.69
CDKN2A-205ENST00000479692 MINPP1Q9UNW1 487 aa25.6■■□□□ 1.69
CDKN2A-205ENST00000479692 SUPT20HQ8NEM7 779 aa25.59■■□□□ 1.69
CDKN2A-205ENST00000479692 EXOC6BQ9Y2D4 811 aa25.59■■□□□ 1.69
CDKN2A-205ENST00000479692 NOP58Q9Y2X3 529 aaKnown RBP25.59■■□□□ 1.69
CDKN2A-205ENST00000479692 XDHP47989 1333 aa25.59■■□□□ 1.69
CDKN2A-205ENST00000479692 APBB1O00213 710 aa25.58■■□□□ 1.69
CDKN2A-205ENST00000479692 CHRNDQ07001 517 aa25.58■■□□□ 1.69
CDKN2A-205ENST00000479692 LRRC24Q50LG9 513 aa25.58■■□□□ 1.69
CDKN2A-205ENST00000479692 GCC1Q96CN9 775 aa25.58■■□□□ 1.69
CDKN2A-205ENST00000479692 PUS3Q9BZE2 481 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-205ENST00000479692 C6orf229H3BNL8 230 aa25.57■■□□□ 1.68
CDKN2A-205ENST00000479692 GGA1Q9UJY5 639 aa25.57■■□□□ 1.68
CDKN2A-205ENST00000479692 AKAP2Q9Y2D5 859 aa25.57■■□□□ 1.68
CDKN2A-205ENST00000479692 RIPOR2Q9Y4F9 1068 aa25.57■■□□□ 1.68
CDKN2A-205ENST00000479692 ATP2B4P23634 1241 aa25.56■■□□□ 1.68
CDKN2A-205ENST00000479692 KIF1BPQ96EK5 621 aa25.56■■□□□ 1.68
CDKN2A-205ENST00000479692 PPP4R2Q9NY27 417 aa25.56■■□□□ 1.68
CDKN2A-205ENST00000479692 DLEC1Q9Y238 1755 aa25.56■■□□□ 1.68
CDKN2A-205ENST00000479692 GRIN3BO60391 1043 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 UFL1O94874 794 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 EYA3Q99504 573 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 DCTPP1Q9H773 170 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 LEMD3Q9Y2U8 911 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 CHD4Q14839 1912 aa25.55■■□□□ 1.68
CDKN2A-205ENST00000479692 PDE8BO95263 885 aa25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 GPSM2P81274 684 aa25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 PUM3Q15397 648 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 ARHGAP27Q6ZUM4 889 aa25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 HELBQ8NG08 1087 aaPredicted RBP25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 LRRCC1Q9C099 1032 aa25.54■■□□□ 1.68
CDKN2A-205ENST00000479692 G3V3G9 751 aa25.53■■□□□ 1.68
CDKN2A-205ENST00000479692 DCAF8Q5TAQ9 597 aa25.53■■□□□ 1.68
CDKN2A-205ENST00000479692 ATG9AQ7Z3C6 839 aa25.53■■□□□ 1.68
CDKN2A-205ENST00000479692 CLASRPQ8N2M8 674 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-205ENST00000479692 C7orf43Q8WVR3 580 aa25.53■■□□□ 1.68
CDKN2A-205ENST00000479692 TAF5LO75529 589 aa25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 IFIT1P09914 478 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 SLC5A1P13866 664 aa25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 TFCP2Q12800 502 aa25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 PODXL2Q9NZ53 605 aa25.52■■□□□ 1.68
CDKN2A-205ENST00000479692 KIAA1551Q9HCM1 1747 aa25.51■■□□□ 1.68
CDKN2A-205ENST00000479692 ATP2B3Q16720 1220 aa25.51■■□□□ 1.67
CDKN2A-205ENST00000479692 OLFM4Q6UX06 510 aa25.51■■□□□ 1.67
CDKN2A-205ENST00000479692 ZNF804BA4D1E1 1349 aa25.51■■□□□ 1.67
CDKN2A-205ENST00000479692 FKBP4Q02790 459 aaKnown RBP eCLIP25.5■■□□□ 1.67
CDKN2A-205ENST00000479692 UBE4AQ14139 1066 aa25.5■■□□□ 1.67
CDKN2A-205ENST00000479692 GORABQ5T7V8 394 aa25.5■■□□□ 1.67
CDKN2A-205ENST00000479692 RHPN1Q8TCX5 695 aa25.5■■□□□ 1.67
CDKN2A-205ENST00000479692 ZC3H12CQ9C0D7 883 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-205ENST00000479692 VPS37DQ86XT2 251 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 TBC1D16Q8TBP0 767 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 LPIN2Q92539 896 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 NEUROD6Q96NK8 337 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 PSMD1Q99460 953 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 SLX4Q8IY92 1834 aa25.49■■□□□ 1.67
CDKN2A-205ENST00000479692 IGHDP01880 384 aa25.48■■□□□ 1.67
CDKN2A-205ENST00000479692 WASHC4Q2M389 1173 aa25.48■■□□□ 1.67
CDKN2A-205ENST00000479692 CAVIN4Q5BKX8 364 aa25.48■■□□□ 1.67
CDKN2A-205ENST00000479692 ANKRD45Q5TZF3 282 aa25.48■■□□□ 1.67
CDKN2A-205ENST00000479692 CENPQQ7L2Z9 268 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-205ENST00000479692 SASH1O94885 1247 aa25.47■■□□□ 1.67
CDKN2A-205ENST00000479692 IFIT2P09913 472 aaKnown RBP25.47■■□□□ 1.67
CDKN2A-205ENST00000479692 GPR108Q9NPR9 543 aa25.47■■□□□ 1.67
CDKN2A-205ENST00000479692 YBX3P16989 372 aaKnown RBP eCLIP25.46■■□□□ 1.67
CDKN2A-205ENST00000479692 B4GALNT3Q6L9W6 998 aa25.46■■□□□ 1.67
CDKN2A-205ENST00000479692 VPS33BQ9H267 617 aa25.46■■□□□ 1.67
CDKN2A-205ENST00000479692 IL1RAPL2Q9NP60 686 aa25.46■■□□□ 1.67
CDKN2A-205ENST00000479692 TAF1P21675 1872 aa25.45■■□□□ 1.67
CDKN2A-205ENST00000479692 PPIP5K2O43314 1243 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 TNNI3KQ59H18 835 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 AACSQ86V21 672 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 SMC5Q8IY18 1101 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 VGLL2Q8N8G2 317 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 GPATCH3Q96I76 525 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 RTFDC1Q9BY42 306 aaPredicted RBP25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 POLLQ9UGP5 575 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 FPGT-TNNI3KV9GXZ4 949 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 CACNA1SQ13698 1873 aa25.45■■□□□ 1.66
CDKN2A-205ENST00000479692 A0A1B0GUL7 405 aa25.44■■□□□ 1.66
CDKN2A-205ENST00000479692 RIMBP2O15034 1052 aa25.44■■□□□ 1.66
CDKN2A-205ENST00000479692 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
CDKN2A-205ENST00000479692 LARGE2Q8N3Y3 721 aa25.44■■□□□ 1.66
CDKN2A-205ENST00000479692 GNL3LQ9NVN8 582 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms