RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
ATG4B-218ENST00000479554 GGA1Q9UJY5 639 aa18.33■□□□□ 0.52
ATG4B-218ENST00000479554 ABT1Q9ULW3 272 aaKnown RBP18.33■□□□□ 0.52
ATG4B-218ENST00000479554 RASSF10A6NK89 507 aa18.32■□□□□ 0.52
ATG4B-218ENST00000479554 H7C1D1 291 aa18.32■□□□□ 0.52
ATG4B-218ENST00000479554 PSMD14O00487 310 aa18.32■□□□□ 0.52
ATG4B-218ENST00000479554 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 MICALL2Q8IY33 904 aa18.32■□□□□ 0.52
ATG4B-218ENST00000479554 ZC3H12CQ9C0D7 883 aaKnown RBP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 CNOT7Q9UIV1 285 aaKnown RBP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-218ENST00000479554 TRPM7Q96QT4 1865 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 XDHP47989 1333 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 G3V3G9 751 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 TRAF5O00463 557 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 VAMP4O75379 141 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 DEFB115Q30KQ5 88 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 TTLL11Q8NHH1 800 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 TRPM4Q8TD43 1214 aa18.31■□□□□ 0.52
ATG4B-218ENST00000479554 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 CACNA1FO60840 1977 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 RPS12P25398 132 aaKnown RBP18.3■□□□□ 0.52
ATG4B-218ENST00000479554 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 DPF2Q92785 391 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 GREM2Q9H772 168 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
ATG4B-218ENST00000479554 H7C1W4 665 aa18.29■□□□□ 0.52
ATG4B-218ENST00000479554 HIRAP54198 1017 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-218ENST00000479554 GCKRQ14397 625 aa18.29■□□□□ 0.52
ATG4B-218ENST00000479554 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
ATG4B-218ENST00000479554 GLIS2Q9BZE0 524 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-218ENST00000479554 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-218ENST00000479554 PGAP2Q9UHJ9 254 aa18.29■□□□□ 0.52
ATG4B-218ENST00000479554 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
ATG4B-218ENST00000479554 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
ATG4B-218ENST00000479554 KCNQ5Q9NR82 932 aa18.28■□□□□ 0.52
ATG4B-218ENST00000479554 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
ATG4B-218ENST00000479554 CST9Q5W186 159 aa18.27■□□□□ 0.52
ATG4B-218ENST00000479554 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
ATG4B-218ENST00000479554 BSDC1Q9NW68 430 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-218ENST00000479554 SCN9AQ15858 1988 aa18.27■□□□□ 0.52
ATG4B-218ENST00000479554 TBC1D10BQ4KMP7 808 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-218ENST00000479554 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-218ENST00000479554 CDC37L1Q7L3B6 337 aa18.26■□□□□ 0.51
ATG4B-218ENST00000479554 SAMD7Q7Z3H4 446 aa18.26■□□□□ 0.51
ATG4B-218ENST00000479554 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
ATG4B-218ENST00000479554 THSD7BQ9C0I4 1608 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 FOXN1O15353 648 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
ATG4B-218ENST00000479554 VIL1P09327 827 aaKnown RBP18.25■□□□□ 0.51
ATG4B-218ENST00000479554 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
ATG4B-218ENST00000479554 CASP7P55210 303 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 TNS4Q8IZW8 715 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 MINPP1Q9UNW1 487 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
ATG4B-218ENST00000479554 PSME4Q14997 1843 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 EGFRP00533 1210 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 ITGA6P23229 1130 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 ECE1P42892 770 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 ZNF408Q9H9D4 720 aa18.24■□□□□ 0.51
ATG4B-218ENST00000479554 ZNF609O15014 1411 aa18.23■□□□□ 0.51
ATG4B-218ENST00000479554 F6X3S4 739 aa18.23■□□□□ 0.51
ATG4B-218ENST00000479554 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
ATG4B-218ENST00000479554 GRM1Q13255 1194 aa18.23■□□□□ 0.51
ATG4B-218ENST00000479554 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
ATG4B-218ENST00000479554 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
ATG4B-218ENST00000479554 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-218ENST00000479554 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 RSBN1LQ6PCB5 846 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-218ENST00000479554 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 AGBL3Q8NEM8 1001 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 WBP1LQ9NX94 342 aa18.22■□□□□ 0.51
ATG4B-218ENST00000479554 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-218ENST00000479554 CSF1RP07333 972 aa18.21■□□□□ 0.51
ATG4B-218ENST00000479554 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-218ENST00000479554 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
ATG4B-218ENST00000479554 SAPCD2Q86UD0 394 aa18.21■□□□□ 0.51
ATG4B-218ENST00000479554 DCPSQ96C86 337 aaKnown RBP18.21■□□□□ 0.51
ATG4B-218ENST00000479554 ZNF521Q96K83 1311 aa18.21■□□□□ 0.51
ATG4B-218ENST00000479554 USP17L3A6NCW0 530 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 USP17L4A6NCW7 530 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 USP17L1Q7RTZ2 530 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
ATG4B-218ENST00000479554 ANKRD18BA2A2Z9 1011 aa18.19■□□□□ 0.5
ATG4B-218ENST00000479554 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-218ENST00000479554 HHIPL1Q96JK4 782 aa18.19■□□□□ 0.5
ATG4B-218ENST00000479554 PRDM10Q9NQV6 1147 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms