RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 RPGRQ92834 1020 aaKnown RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 MKRN1Q9UHC7 482 aaKnown RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 FEZ2Q9UHY8 353 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 CNTNAP1P78357 1384 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 DUOX1Q9NRD9 1551 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 TAF1P21675 1872 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 MYBBP1AQ9BQG0 1328 aaKnown RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 COL4A1P02462 1669 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 E9PSI1 815 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 PPEF1O14829 653 aaPredicted RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 EIF2S2P20042 333 aaKnown RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 EPHX2P34913 555 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 ZKSCAN8Q15776 578 aaPredicted RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 PARP10Q53GL7 1025 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 EAPPQ56P03 285 aaPredicted RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 SPTY2D1Q68D10 685 aaPredicted RBP7.26□□□□□ -1.25
TRA2B-211ENST00000477939 RINLQ6ZS11 566 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 CCDC146Q8IYE0 955 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 GPC2Q8N158 579 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 MKL1Q969V6 931 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 CRAMP1Q96RY5 1269 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 HACL1Q9UJ83 578 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 SH3BP1Q9Y3L3 701 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 THSD7BQ9C0I4 1608 aa7.26□□□□□ -1.25
TRA2B-211ENST00000477939 MYCNP04198 464 aaPredicted RBP7.25□□□□□ -1.25
TRA2B-211ENST00000477939 ERCC3P19447 782 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 SCNN1DP51172 638 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 LMOD3Q0VAK6 560 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 PPP1R42Q7Z4L9 355 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 JDP2Q8WYK2 163 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 TRIM35Q9UPQ4 493 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 ABCC4O15439 1325 aa7.25□□□□□ -1.25
TRA2B-211ENST00000477939 TRPM7Q96QT4 1865 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 CHL1O00533 1208 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 SATB1Q01826 763 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 MAP2K1Q02750 393 aaPredicted RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 AIMP1Q12904 312 aaKnown RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 DDX10Q13206 875 aaKnown RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 AOC3Q16853 763 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 SLC10A5Q5PT55 438 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 MAP1SQ66K74 1059 aaPredicted RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 COPS6Q7L5N1 327 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 PNMA8AQ86V59 439 aaPredicted RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 TNS4Q8IZW8 715 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 LARGE2Q8N3Y3 721 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 XAGE3Q8WTP9 111 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 RBM17Q96I25 401 aaKnown RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 UTP14AQ9BVJ6 771 aaKnown RBP7.24□□□□□ -1.25
TRA2B-211ENST00000477939 CHPF2Q9P2E5 772 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 ATP6V0A2Q9Y487 856 aa7.24□□□□□ -1.25
TRA2B-211ENST00000477939 TMEM88BA6NKF7 163 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 PPIP5K2O43314 1243 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 HCLS1P14317 486 aaPredicted RBP7.23□□□□□ -1.25
TRA2B-211ENST00000477939 EPS15P42566 896 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
TRA2B-211ENST00000477939 CNTROBQ8N137 903 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 ZNF428Q96B54 188 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 DDX21Q9NR30 783 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRA2B-211ENST00000477939 NUB1Q9Y5A7 615 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
TRA2B-211ENST00000477939 LOC102724159A0A0B4J2E5 919 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 RASSF10A6NK89 507 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 FOXN1O15353 648 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 KDM4AO75164 1064 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 CAPN15O75808 1086 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 LMOD1P29536 600 aaPredicted RBP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 VEGFBP49765 207 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 FMR1Q06787 632 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 TCIRG1Q13488 830 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 WDR43Q15061 677 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 PWP2Q15269 919 aaKnown RBP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 HDGFL1Q5TGJ6 251 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 NIM1KQ8IY84 436 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 FAM9BQ8IZU0 186 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 PAIP2Q9BPZ3 127 aaKnown RBP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
TRA2B-211ENST00000477939 MYH16Q9H6N6 1097 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 CLEC11AQ9Y240 323 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 MRVI1Q9Y6F6 885 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
TRA2B-211ENST00000477939 HOXB7P09629 217 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 ARID4AP29374 1257 aaPredicted RBP7.21□□□□□ -1.26
TRA2B-211ENST00000477939 KIAA2012Q0VF49 1180 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 GRAPQ13588 217 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 PLBD2Q8NHP8 589 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 GRAPLQ8TC17 118 aaPredicted RBP7.21□□□□□ -1.26
TRA2B-211ENST00000477939 GPRC5DQ9NZD1 345 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
TRA2B-211ENST00000477939 MTMR7Q9Y216 660 aa7.21□□□□□ -1.26
TRA2B-211ENST00000477939 SCN9AQ15858 1988 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 ATP5J2-PTCD1G3V325 749 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms