RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 UFL1O94874 794 aa22.38■■□□□ 1.17
PTPN7-209ENST00000477554 HSP90B1P14625 803 aaKnown RBP22.38■■□□□ 1.17
PTPN7-209ENST00000477554 RARSP54136 660 aaKnown RBP22.38■■□□□ 1.17
PTPN7-209ENST00000477554 GPC2Q8N158 579 aa22.38■■□□□ 1.17
PTPN7-209ENST00000477554 SUPT20HQ8NEM7 779 aa22.38■■□□□ 1.17
PTPN7-209ENST00000477554 ZNRF3Q9ULT6 936 aa22.38■■□□□ 1.17
PTPN7-209ENST00000477554 MINPP1Q9UNW1 487 aa22.38■■□□□ 1.17
PTPN7-209ENST00000477554 SNAP23O00161 211 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 EPS15P42566 896 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 EIF6P56537 245 aaKnown RBP22.37■■□□□ 1.17
PTPN7-209ENST00000477554 WASHC4Q2M389 1173 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 LMBR1LQ6UX01 489 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 ZNF594Q96JF6 807 aaPredicted RBP22.37■■□□□ 1.17
PTPN7-209ENST00000477554 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 ANKIB1Q9P2G1 1089 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 ADAMTSL1Q8N6G6 1762 aa22.37■■□□□ 1.17
PTPN7-209ENST00000477554 A0A1B0GUL6 1792 aa22.36■■□□□ 1.17
PTPN7-209ENST00000477554 PTPRCP08575 1304 aa22.36■■□□□ 1.17
PTPN7-209ENST00000477554 C9orf78Q9NZ63 289 aaPredicted RBP22.36■■□□□ 1.17
PTPN7-209ENST00000477554 KLRK1P26718 216 aa22.35■■□□□ 1.17
PTPN7-209ENST00000477554 CDC5LQ99459 802 aaKnown RBP22.35■■□□□ 1.17
PTPN7-209ENST00000477554 BSDC1Q9NW68 430 aaPredicted RBP22.35■■□□□ 1.17
PTPN7-209ENST00000477554 CHMP3Q9Y3E7 222 aa22.35■■□□□ 1.17
PTPN7-209ENST00000477554 BCAR3O75815 825 aa22.34■■□□□ 1.17
PTPN7-209ENST00000477554 HACL1Q9UJ83 578 aa22.34■■□□□ 1.17
PTPN7-209ENST00000477554 GGA1Q9UJY5 639 aa22.34■■□□□ 1.17
PTPN7-209ENST00000477554 EPHX2P34913 555 aa22.33■■□□□ 1.17
PTPN7-209ENST00000477554 EAPPQ56P03 285 aaPredicted RBP22.33■■□□□ 1.17
PTPN7-209ENST00000477554 TXNRD3Q86VQ6 643 aa22.33■■□□□ 1.17
PTPN7-209ENST00000477554 VPS33BQ9H267 617 aa22.33■■□□□ 1.17
PTPN7-209ENST00000477554 ZBTB12Q9Y330 459 aaPredicted RBP22.33■■□□□ 1.17
PTPN7-209ENST00000477554 UTYO14607 1347 aa22.33■■□□□ 1.16
PTPN7-209ENST00000477554 ECE2O60344 883 aa22.32■■□□□ 1.16
PTPN7-209ENST00000477554 GMPSP49915 693 aaPredicted RBP22.32■■□□□ 1.16
PTPN7-209ENST00000477554 ANKRD44Q8N8A2 993 aa22.32■■□□□ 1.16
PTPN7-209ENST00000477554 SMC1BQ8NDV3 1235 aa22.32■■□□□ 1.16
PTPN7-209ENST00000477554 USP44Q9H0E7 712 aa22.32■■□□□ 1.16
PTPN7-209ENST00000477554 XDHP47989 1333 aa22.32■■□□□ 1.16
PTPN7-209ENST00000477554 PSMD14O00487 310 aa22.31■■□□□ 1.16
PTPN7-209ENST00000477554 FSTL1Q12841 308 aa22.31■■□□□ 1.16
PTPN7-209ENST00000477554 HELBQ8NG08 1087 aaPredicted RBP22.31■■□□□ 1.16
PTPN7-209ENST00000477554 BICC1Q9H694 974 aaKnown RBP22.31■■□□□ 1.16
PTPN7-209ENST00000477554 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
PTPN7-209ENST00000477554 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
PTPN7-209ENST00000477554 CIAPIN1Q6FI81 312 aa22.31■■□□□ 1.16
PTPN7-209ENST00000477554 ZNF646O15015 1829 aaPredicted RBP22.3■■□□□ 1.16
PTPN7-209ENST00000477554 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
PTPN7-209ENST00000477554 TAF5LO75529 589 aa22.3■■□□□ 1.16
PTPN7-209ENST00000477554 IGHMBP2P38935 993 aaKnown RBP22.3■■□□□ 1.16
PTPN7-209ENST00000477554 CHRNDQ07001 517 aa22.3■■□□□ 1.16
PTPN7-209ENST00000477554 PUS3Q9BZE2 481 aaKnown RBP22.3■■□□□ 1.16
PTPN7-209ENST00000477554 CCT4P50991 539 aaKnown RBP22.29■■□□□ 1.16
PTPN7-209ENST00000477554 BRPF1P55201 1214 aaPredicted RBP22.29■■□□□ 1.16
PTPN7-209ENST00000477554 FMR1Q06787 632 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTPN7-209ENST00000477554 IFIT5Q13325 482 aaKnown RBP22.29■■□□□ 1.16
PTPN7-209ENST00000477554 CHADLQ6NUI6 762 aa22.29■■□□□ 1.16
PTPN7-209ENST00000477554 GPRC5DQ9NZD1 345 aa22.29■■□□□ 1.16
PTPN7-209ENST00000477554 EGFRP00533 1210 aa22.28■■□□□ 1.16
PTPN7-209ENST00000477554 MAP1SQ66K74 1059 aaPredicted RBP22.28■■□□□ 1.16
PTPN7-209ENST00000477554 KLHDC4Q8TBB5 520 aa22.28■■□□□ 1.16
PTPN7-209ENST00000477554 EYA3Q99504 573 aa22.28■■□□□ 1.16
PTPN7-209ENST00000477554 MPHOSPH8Q99549 860 aa22.28■■□□□ 1.16
PTPN7-209ENST00000477554 ZC3H12CQ9C0D7 883 aaKnown RBP22.28■■□□□ 1.16
PTPN7-209ENST00000477554 ATP2B4P23634 1241 aa22.27■■□□□ 1.16
PTPN7-209ENST00000477554 IRS2Q9Y4H2 1338 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 PCNTO95613 3336 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 HIRAP54198 1017 aaPredicted RBP22.26■■□□□ 1.15
PTPN7-209ENST00000477554 LDHDQ86WU2 507 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 TRPM4Q8TD43 1214 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 MXD3Q9BW11 206 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 CLEC11AQ9Y240 323 aa22.26■■□□□ 1.15
PTPN7-209ENST00000477554 PSME4Q14997 1843 aa22.25■■□□□ 1.15
PTPN7-209ENST00000477554 RABL6Q3YEC7 729 aaPredicted RBP22.25■■□□□ 1.15
PTPN7-209ENST00000477554 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
PTPN7-209ENST00000477554 DNAJC5GQ8N7S2 189 aa22.24■■□□□ 1.15
PTPN7-209ENST00000477554 ZNF804BA4D1E1 1349 aa22.24■■□□□ 1.15
PTPN7-209ENST00000477554 MED23Q9ULK4 1368 aa22.24■■□□□ 1.15
PTPN7-209ENST00000477554 PLIN1O60240 522 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 TRIM27P14373 513 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 LMOD1P29536 600 aaPredicted RBP22.23■■□□□ 1.15
PTPN7-209ENST00000477554 APLP1P51693 650 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 CCDC57Q2TAC2 916 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 FRAT1Q92837 279 aaPredicted RBP22.23■■□□□ 1.15
PTPN7-209ENST00000477554 MEIS3Q99687 375 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 TNIP1Q15025 636 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 DLK2Q6UY11 383 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 SAMD7Q7Z3H4 446 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 MICALL2Q8IY33 904 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
PTPN7-209ENST00000477554 CNOT7Q9UIV1 285 aaKnown RBP22.23■■□□□ 1.15
PTPN7-209ENST00000477554 PASKQ96RG2 1323 aa22.22■■□□□ 1.15
PTPN7-209ENST00000477554 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
PTPN7-209ENST00000477554 LDHAL6AQ6ZMR3 332 aa22.22■■□□□ 1.15
PTPN7-209ENST00000477554 API5Q9BZZ5 524 aaKnown RBP22.22■■□□□ 1.15
PTPN7-209ENST00000477554 VIL1P09327 827 aaKnown RBP22.21■■□□□ 1.15
PTPN7-209ENST00000477554 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
PTPN7-209ENST00000477554 TRAF5O00463 557 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 RFX5P48382 616 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms