RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 BECN1Q14457 450 aa16.13■□□□□ 0.17
SEC22A-205ENST00000477063 ERFEQ4G0M1 354 aa16.13■□□□□ 0.17
SEC22A-205ENST00000477063 TSHZ3Q63HK5 1081 aa16.13■□□□□ 0.17
SEC22A-205ENST00000477063 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
SEC22A-205ENST00000477063 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
SEC22A-205ENST00000477063 ZBTB22O15209 634 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
SEC22A-205ENST00000477063 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 LPIN2Q92539 896 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 DBNDD2Q9BQY9 259 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
SEC22A-205ENST00000477063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
SEC22A-205ENST00000477063 PHF14O94880 888 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 MCCP23508 829 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 TM4SF1P30408 202 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 NFIXQ14938 502 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 CNBD1Q8NA66 436 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 BSDC1Q9NW68 430 aaPredicted RBP16.11■□□□□ 0.17
SEC22A-205ENST00000477063 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
SEC22A-205ENST00000477063 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
SEC22A-205ENST00000477063 SGSM2O43147 1006 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 ANAPC15P60006 121 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 ST5P78524 1137 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 IL17RAQ96F46 866 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
SEC22A-205ENST00000477063 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 SLC5A1P13866 664 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 FGFR2P21802 821 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
SEC22A-205ENST00000477063 BOLA2Q9H3K6 86 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 TFCP2L1Q9NZI6 479 aa16.09■□□□□ 0.17
SEC22A-205ENST00000477063 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.16
SEC22A-205ENST00000477063 TIMM10P62072 90 aa16.08■□□□□ 0.16
SEC22A-205ENST00000477063 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
SEC22A-205ENST00000477063 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
SEC22A-205ENST00000477063 ANKRD2Q9GZV1 360 aa16.08■□□□□ 0.16
SEC22A-205ENST00000477063 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
SEC22A-205ENST00000477063 NPHP1O15259 732 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 IGSF3O75054 1194 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
SEC22A-205ENST00000477063 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
SEC22A-205ENST00000477063 SNX21Q969T3 373 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
SEC22A-205ENST00000477063 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
SEC22A-205ENST00000477063 SERPINB2P05120 415 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 ZFYP08048 801 aaPredicted RBP16.06■□□□□ 0.16
SEC22A-205ENST00000477063 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
SEC22A-205ENST00000477063 BAG6P46379 1132 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
SEC22A-205ENST00000477063 RABEP1Q15276 862 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
SEC22A-205ENST00000477063 CRY2Q49AN0 593 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 SEC31BQ9NQW1 1179 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
SEC22A-205ENST00000477063 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
SEC22A-205ENST00000477063 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
SEC22A-205ENST00000477063 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
SEC22A-205ENST00000477063 CHRNDQ07001 517 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 TMED8Q6PL24 325 aaPredicted RBP16.04■□□□□ 0.16
SEC22A-205ENST00000477063 ANO2Q9NQ90 1003 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 MYH7P12883 1935 aa16.04■□□□□ 0.16
SEC22A-205ENST00000477063 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
SEC22A-205ENST00000477063 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
SEC22A-205ENST00000477063 MAP4K4O95819 1239 aaPredicted RBP16.03■□□□□ 0.16
SEC22A-205ENST00000477063 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
SEC22A-205ENST00000477063 GRAPQ13588 217 aa16.03■□□□□ 0.16
SEC22A-205ENST00000477063 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
SEC22A-205ENST00000477063 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
SEC22A-205ENST00000477063 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SEC22A-205ENST00000477063 UPF1Q92900 1129 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEC22A-205ENST00000477063 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.16
SEC22A-205ENST00000477063 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
SEC22A-205ENST00000477063 SEMA3EO15041 775 aa16.02■□□□□ 0.16
SEC22A-205ENST00000477063 HSPA4P34932 840 aa16.02■□□□□ 0.16
SEC22A-205ENST00000477063 SLC15A2Q16348 729 aa16.02■□□□□ 0.16
SEC22A-205ENST00000477063 CCDC102BQ68D86 513 aa16.02■□□□□ 0.16
SEC22A-205ENST00000477063 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.16
SEC22A-205ENST00000477063 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
SEC22A-205ENST00000477063 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
SEC22A-205ENST00000477063 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms