RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 SMC5Q8IY18 1101 aa19.74■□□□□ 0.75
PSMD4-211ENST00000476855 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
PSMD4-211ENST00000476855 MKRN1Q9UHC7 482 aaKnown RBP19.74■□□□□ 0.75
PSMD4-211ENST00000476855 KLRG2A4D1S0 409 aaPredicted RBP19.73■□□□□ 0.75
PSMD4-211ENST00000476855 NPHP1O15259 732 aa19.73■□□□□ 0.75
PSMD4-211ENST00000476855 PTPN12Q05209 780 aaKnown RBP19.73■□□□□ 0.75
PSMD4-211ENST00000476855 CENPQQ7L2Z9 268 aaPredicted RBP19.73■□□□□ 0.75
PSMD4-211ENST00000476855 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
PSMD4-211ENST00000476855 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
PSMD4-211ENST00000476855 COPRSQ9NQ92 184 aa19.73■□□□□ 0.75
PSMD4-211ENST00000476855 C21orf2O43822 256 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 ITGA6P23229 1130 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 CCDC88AQ3V6T2 1871 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 CRY2Q49AN0 593 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 CCDC152Q4G0S7 254 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 ZNF622Q969S3 477 aaKnown RBP eCLIP19.72■□□□□ 0.754e-8■■□□□ 13.5
PSMD4-211ENST00000476855 BRIP1Q9BX63 1249 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 ZNF219Q9P2Y4 722 aaPredicted RBP19.72■□□□□ 0.75
PSMD4-211ENST00000476855 PA2G4Q9UQ80 394 aaKnown RBP19.72■□□□□ 0.75
PSMD4-211ENST00000476855 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
PSMD4-211ENST00000476855 CHMP3Q9Y3E7 222 aa19.72■□□□□ 0.75
PSMD4-211ENST00000476855 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
PSMD4-211ENST00000476855 PDZRN3Q9UPQ7 1066 aa19.71■□□□□ 0.75
PSMD4-211ENST00000476855 ARAP2Q8WZ64 1704 aa19.71■□□□□ 0.75
PSMD4-211ENST00000476855 PDE6BP35913 854 aa19.7■□□□□ 0.74
PSMD4-211ENST00000476855 IFIT5Q13325 482 aaKnown RBP19.7■□□□□ 0.74
PSMD4-211ENST00000476855 CCDC57Q2TAC2 916 aa19.7■□□□□ 0.74
PSMD4-211ENST00000476855 GCC1Q96CN9 775 aa19.7■□□□□ 0.74
PSMD4-211ENST00000476855 SEC31BQ9NQW1 1179 aa19.7■□□□□ 0.74
PSMD4-211ENST00000476855 ANKRD18BA2A2Z9 1011 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 FOXN1O15353 648 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 POTEIP0CG38 1075 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 ZNF594Q96JF6 807 aaPredicted RBP19.69■□□□□ 0.74
PSMD4-211ENST00000476855 EXOC6BQ9Y2D4 811 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 SLX4Q8IY92 1834 aa19.69■□□□□ 0.74
PSMD4-211ENST00000476855 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
PSMD4-211ENST00000476855 CNTNAP1P78357 1384 aa19.68■□□□□ 0.74
PSMD4-211ENST00000476855 LTBP1Q14766 1721 aa19.68■□□□□ 0.74
PSMD4-211ENST00000476855 SURF6O75683 361 aaKnown RBP19.67■□□□□ 0.74
PSMD4-211ENST00000476855 DDNO94850 711 aaPredicted RBP19.67■□□□□ 0.74
PSMD4-211ENST00000476855 PRDM10Q9NQV6 1147 aa19.67■□□□□ 0.74
PSMD4-211ENST00000476855 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
PSMD4-211ENST00000476855 ATG9AQ7Z3C6 839 aa19.66■□□□□ 0.74
PSMD4-211ENST00000476855 SIL1Q9H173 461 aa19.66■□□□□ 0.74
PSMD4-211ENST00000476855 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
PSMD4-211ENST00000476855 FER1L6Q2WGJ9 1857 aa19.65■□□□□ 0.74
PSMD4-211ENST00000476855 EYA2O00167 538 aa19.65■□□□□ 0.74
PSMD4-211ENST00000476855 CIAO1O76071 339 aa19.65■□□□□ 0.74
PSMD4-211ENST00000476855 LRRC24Q50LG9 513 aa19.65■□□□□ 0.74
PSMD4-211ENST00000476855 HSP90AB4PQ58FF6 505 aa19.65■□□□□ 0.74
PSMD4-211ENST00000476855 PUS3Q9BZE2 481 aaKnown RBP19.65■□□□□ 0.74
PSMD4-211ENST00000476855 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.74
PSMD4-211ENST00000476855 IQCA1LA6NCM1 817 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 SASH1O94885 1247 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 SRGNP10124 158 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
PSMD4-211ENST00000476855 NUCB1Q02818 461 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 TAF7LQ5H9L4 462 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 LDHDQ86WU2 507 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 CELF1Q92879 486 aaKnown RBP19.64■□□□□ 0.73
PSMD4-211ENST00000476855 CNKSR1Q969H4 720 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 AIDAQ96BJ3 306 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
PSMD4-211ENST00000476855 RIPOR2Q9Y4F9 1068 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 PASKQ96RG2 1323 aa19.64■□□□□ 0.73
PSMD4-211ENST00000476855 G3BP1Q13283 466 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■□□□ 11.8
PSMD4-211ENST00000476855 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
PSMD4-211ENST00000476855 RPGRQ92834 1020 aaKnown RBP19.63■□□□□ 0.73
PSMD4-211ENST00000476855 CRAMP1Q96RY5 1269 aa19.63■□□□□ 0.73
PSMD4-211ENST00000476855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.63■□□□□ 0.73
PSMD4-211ENST00000476855 GRAPQ13588 217 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 SOGA3Q5TF21 947 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 STYK1Q6J9G0 422 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 PRPF40BQ6NWY9 871 aaKnown RBP19.62■□□□□ 0.73
PSMD4-211ENST00000476855 LDHAL6AQ6ZMR3 332 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 ANKRD18AQ8IVF6 992 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 GRAPLQ8TC17 118 aaPredicted RBP19.62■□□□□ 0.73
PSMD4-211ENST00000476855 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
PSMD4-211ENST00000476855 RBM17Q96I25 401 aaKnown RBP19.62■□□□□ 0.73
PSMD4-211ENST00000476855 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
PSMD4-211ENST00000476855 NPR1P16066 1061 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 IGHMBP2P38935 993 aaKnown RBP19.61■□□□□ 0.73
PSMD4-211ENST00000476855 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
PSMD4-211ENST00000476855 VEGFBP49765 207 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 MASTLQ96GX5 879 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
PSMD4-211ENST00000476855 LRRCC1Q9C099 1032 aa19.61■□□□□ 0.73
PSMD4-211ENST00000476855 TMEM88BA6NKF7 163 aa19.6■□□□□ 0.73
PSMD4-211ENST00000476855 APBB1O00213 710 aa19.6■□□□□ 0.73
PSMD4-211ENST00000476855 RPS8P62241 208 aaKnown RBP19.6■□□□□ 0.73
PSMD4-211ENST00000476855 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
PSMD4-211ENST00000476855 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
PSMD4-211ENST00000476855 TAF1DQ9H5J8 278 aaPredicted RBP19.6■□□□□ 0.73
PSMD4-211ENST00000476855 BSDC1Q9NW68 430 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms