RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 DBNDD1Q9H9R9 158 aa20.66■□□□□ 0.9
COL1A1-205ENST00000476387 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
COL1A1-205ENST00000476387 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
COL1A1-205ENST00000476387 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 E9PSI1 815 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 H7C1D1 291 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 PSMD14O00487 310 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 RIMBP2O15034 1052 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 ECE2O60344 883 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
COL1A1-205ENST00000476387 CTSWP56202 376 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 ZC3H12CQ9C0D7 883 aaKnown RBP20.65■□□□□ 0.9
COL1A1-205ENST00000476387 ANKIB1Q9P2G1 1089 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 GGA1Q9UJY5 639 aa20.65■□□□□ 0.9
COL1A1-205ENST00000476387 UFL1O94874 794 aa20.64■□□□□ 0.89
COL1A1-205ENST00000476387 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
COL1A1-205ENST00000476387 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
COL1A1-205ENST00000476387 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.89
COL1A1-205ENST00000476387 RTL9Q8NET4 1388 aa20.63■□□□□ 0.89
COL1A1-205ENST00000476387 TRAF5O00463 557 aa20.63■□□□□ 0.89
COL1A1-205ENST00000476387 HIRAP54198 1017 aaPredicted RBP20.63■□□□□ 0.89
COL1A1-205ENST00000476387 CST9Q5W186 159 aa20.63■□□□□ 0.89
COL1A1-205ENST00000476387 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
COL1A1-205ENST00000476387 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
COL1A1-205ENST00000476387 XDHP47989 1333 aa20.62■□□□□ 0.89
COL1A1-205ENST00000476387 H7C1W4 665 aa20.62■□□□□ 0.89
COL1A1-205ENST00000476387 FMR1Q06787 632 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL1A1-205ENST00000476387 DOK7Q18PE1 504 aa20.62■□□□□ 0.89
COL1A1-205ENST00000476387 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
COL1A1-205ENST00000476387 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
COL1A1-205ENST00000476387 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
COL1A1-205ENST00000476387 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
COL1A1-205ENST00000476387 TNS4Q8IZW8 715 aa20.61■□□□□ 0.89
COL1A1-205ENST00000476387 DNAAF4Q8WXU2 420 aa20.61■□□□□ 0.89
COL1A1-205ENST00000476387 AIDAQ96BJ3 306 aa20.61■□□□□ 0.89
COL1A1-205ENST00000476387 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
COL1A1-205ENST00000476387 TLL2Q9Y6L7 1015 aa20.61■□□□□ 0.89
COL1A1-205ENST00000476387 SHTN1A0MZ66 631 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 G3V3G9 751 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 VIL1P09327 827 aaKnown RBP20.6■□□□□ 0.89
COL1A1-205ENST00000476387 ATP2B4P23634 1241 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 GCKRQ14397 625 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 DCAF8Q5TAQ9 597 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 GLIS2Q9BZE0 524 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-205ENST00000476387 BSDC1Q9NW68 430 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-205ENST00000476387 WBP1LQ9NX94 342 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 SPEF2Q9C093 1822 aa20.6■□□□□ 0.89
COL1A1-205ENST00000476387 FOXN1O15353 648 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 ECE1P42892 770 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 MIER1Q8N108 512 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 PLA2G12BQ9BX93 195 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 GREM2Q9H772 168 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 KCNQ5Q9NR82 932 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 ZNF609O15014 1411 aa20.59■□□□□ 0.89
COL1A1-205ENST00000476387 CELF2O95319 508 aaKnown RBP20.58■□□□□ 0.89
COL1A1-205ENST00000476387 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.89
COL1A1-205ENST00000476387 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
COL1A1-205ENST00000476387 SCN9AQ15858 1988 aa20.57■□□□□ 0.88
COL1A1-205ENST00000476387 CTCFP49711 727 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-205ENST00000476387 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
COL1A1-205ENST00000476387 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
COL1A1-205ENST00000476387 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
COL1A1-205ENST00000476387 MINPP1Q9UNW1 487 aa20.57■□□□□ 0.88
COL1A1-205ENST00000476387 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
COL1A1-205ENST00000476387 CASP7P55210 303 aa20.56■□□□□ 0.88
COL1A1-205ENST00000476387 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
COL1A1-205ENST00000476387 SAPCD2Q86UD0 394 aa20.56■□□□□ 0.88
COL1A1-205ENST00000476387 HHIPL1Q96JK4 782 aa20.56■□□□□ 0.88
COL1A1-205ENST00000476387 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
COL1A1-205ENST00000476387 AGBL3Q8NEM8 1001 aa20.55■□□□□ 0.88
COL1A1-205ENST00000476387 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
COL1A1-205ENST00000476387 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
COL1A1-205ENST00000476387 F6X3S4 739 aa20.54■□□□□ 0.88
COL1A1-205ENST00000476387 EGFRP00533 1210 aa20.54■□□□□ 0.88
COL1A1-205ENST00000476387 CSF1RP07333 972 aa20.54■□□□□ 0.88
COL1A1-205ENST00000476387 IGHMBP2P38935 993 aaKnown RBP20.54■□□□□ 0.88
COL1A1-205ENST00000476387 CYP4F22Q6NT55 531 aa20.54■□□□□ 0.88
COL1A1-205ENST00000476387 RSBN1LQ6PCB5 846 aaPredicted RBP20.54■□□□□ 0.88
COL1A1-205ENST00000476387 PAXIP1Q6ZW49 1069 aaPredicted RBP20.54■□□□□ 0.88
COL1A1-205ENST00000476387 PSME4Q14997 1843 aa20.53■□□□□ 0.88
COL1A1-205ENST00000476387 ITGA6P23229 1130 aa20.53■□□□□ 0.88
COL1A1-205ENST00000476387 ZNF280AP59817 542 aaPredicted RBP20.53■□□□□ 0.88
COL1A1-205ENST00000476387 KIF4BQ2VIQ3 1234 aa20.53■□□□□ 0.88
COL1A1-205ENST00000476387 KRT26Q7Z3Y9 468 aa20.53■□□□□ 0.88
COL1A1-205ENST00000476387 USP48Q86UV5 1035 aa20.53■□□□□ 0.88
COL1A1-205ENST00000476387 USP17L3A6NCW0 530 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 USP17L4A6NCW7 530 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 MAP2K2P36507 400 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
COL1A1-205ENST00000476387 USP17L1Q7RTZ2 530 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.88
COL1A1-205ENST00000476387 GMLQ99445 158 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 ZNF408Q9H9D4 720 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 LEMD3Q9Y2U8 911 aa20.52■□□□□ 0.88
COL1A1-205ENST00000476387 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
COL1A1-205ENST00000476387 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms