RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 HSCBQ8IWL3 235 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 ZNF454Q8N9F8 522 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 VPS37AQ8NEZ2 397 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 PIK3R5Q8WYR1 880 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 CFAP53Q96M91 514 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 SEZ6LQ9BYH1 1024 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 RANBP17Q9H2T7 1088 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 SPATA31A5Q5VU36 1347 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 SPATA31A7Q8IWB4 1347 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 HSP90AB1P08238 724 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 MS4A1P11836 297 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 ATICP31939 592 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 VEGFBP49765 207 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 STAG1Q8WVM7 1258 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 MUC3BQ9H195 1237 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 CD2APQ9Y5K6 639 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 PLEKHH2Q8IVE3 1493 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 DHX29Q7Z478 1369 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 C1orf167Q5SNV9 1468 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 VGLL3A8MV65 326 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 HIP1RO75146 1068 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 CASQ1P31415 396 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 CD151P48509 253 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 MAP2K5Q13163 448 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 TSNAXIP1Q2TAA8 658 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 JDP2Q8WYK2 163 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 CCDC102AQ96A19 550 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 IFT57Q9NWB7 429 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 KIF15Q9NS87 1388 aa7.38□□□□□ -1.23
SMARCE1-208ENST00000474246 FAM163BP0C2L3 166 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 HSD3B2P26439 372 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 MAP9Q49MG5 647 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 HSP90B2PQ58FF3 399 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 SMAP1Q8IYB5 467 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 ARPC5LQ9BPX5 153 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 NBPF3Q9H094 633 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 ZSWIM4Q9H7M6 989 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 FAM13BQ9NYF5 915 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 ODF2LQ9ULJ1 636 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 PLEKHG1Q9ULL1 1385 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 LDHAP00338 332 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 HMGN5P82970 282 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 SH3D19Q5HYK7 790 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 FILIP1Q7Z7B0 1213 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 PDCL3Q9H2J4 239 aa7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 SUDS3Q9H7L9 328 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 MINK1Q8N4C8 1332 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-208ENST00000474246 COQ9O75208 318 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 VIL1P09327 827 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 TGFB3P10600 412 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 ATP2B1P20020 1258 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 SPNS2Q8IVW8 549 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 PAF1Q8N7H5 531 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 BORCS6Q96GS4 357 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 C8orf48Q96LL4 319 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 P2RX7Q99572 595 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 ZSWIM6Q9HCJ5 1215 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 LHX6Q9UPM6 363 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 FANCIQ9NVI1 1328 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 ADGRL2O95490 1459 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 PLCH1Q4KWH8 1693 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 POM121CA8CG34 1229 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 PES1O00541 588 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 IGHDP01880 384 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 USP5P45974 858 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 ENOX2Q16206 610 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 DNTTIP2Q5QJE6 756 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 CCSAPQ6IQ19 270 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 KRT77Q7Z794 578 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 FAM43AQ8N2R8 423 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 ACRBPQ8NEB7 543 aa7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 IQSEC3Q9UPP2 1182 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-208ENST00000474246 INO80Q9ULG1 1556 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 PREX2Q70Z35 1606 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 IFRD1O00458 451 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 RGS20O76081 388 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 KIAA2012Q0VF49 1180 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 JAZF1Q86VZ6 243 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 PPM1EQ8WY54 764 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 ZDHHC16Q969W1 377 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 ARMC5Q96C12 935 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 CEP89Q96ST8 783 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 ADAM33Q9BZ11 813 aa7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 DIS3Q9Y2L1 958 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-208ENST00000474246 NAT1P18440 290 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 LRPPRCP42704 1394 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms