RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.22□□□□□ -0.29
SP140-208ENST00000473711 UBR3Q6ZT12 1888 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 EYA2O00167 538 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 NPHP1O15259 732 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 TM4SF1P30408 202 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 PDE1AP54750 535 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 ATG9AQ7Z3C6 839 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 STK32BQ9NY57 414 aa13.21□□□□□ -0.29
SP140-208ENST00000473711 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 SERPINB2P05120 415 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
SP140-208ENST00000473711 MX1P20591 662 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
SP140-208ENST00000473711 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 AACSQ86V21 672 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
SP140-208ENST00000473711 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
SP140-208ENST00000473711 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
SP140-208ENST00000473711 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
SP140-208ENST00000473711 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 CIAO1O76071 339 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 GSE1Q14687 1217 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
SP140-208ENST00000473711 C8orf34Q49A92 452 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
SP140-208ENST00000473711 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
SP140-208ENST00000473711 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
SP140-208ENST00000473711 LRP5O75197 1615 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 PYGBP11216 843 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 DDR1Q08345 913 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 PRR5LQ6MZQ0 368 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
SP140-208ENST00000473711 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
SP140-208ENST00000473711 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
SP140-208ENST00000473711 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
SP140-208ENST00000473711 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
SP140-208ENST00000473711 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
SP140-208ENST00000473711 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
SP140-208ENST00000473711 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
SP140-208ENST00000473711 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
SP140-208ENST00000473711 SDSP20132 328 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
SP140-208ENST00000473711 TIMM10P62072 90 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 ST5P78524 1137 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
SP140-208ENST00000473711 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 GPR108Q9NPR9 543 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 DDX60Q8IY21 1712 aaKnown RBP13.15□□□□□ -0.3
SP140-208ENST00000473711 RTL9Q8NET4 1388 aa13.15□□□□□ -0.3
SP140-208ENST00000473711 AOX1Q06278 1338 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 COL24A1Q17RW2 1714 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
SP140-208ENST00000473711 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
SP140-208ENST00000473711 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 DBNDD2Q9BQY9 259 aa13.14□□□□□ -0.31
SP140-208ENST00000473711 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 ERC2O15083 957 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
SP140-208ENST00000473711 MMP10P09238 476 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 DDX46Q7L014 1031 aaKnown RBP13.13□□□□□ -0.31
SP140-208ENST00000473711 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
SP140-208ENST00000473711 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
SP140-208ENST00000473711 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
SP140-208ENST00000473711 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 MYH3P11055 1940 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
SP140-208ENST00000473711 A0A1B0GUL7 405 aa13.12□□□□□ -0.31
SP140-208ENST00000473711 SEC24BO95487 1268 aa13.12□□□□□ -0.31
SP140-208ENST00000473711 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
SP140-208ENST00000473711 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms