RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
CLK1-210ENST00000473565 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
CLK1-210ENST00000473565 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
CLK1-210ENST00000473565 IFIT1P09914 478 aaKnown RBP7.53□□□□□ -1.2
CLK1-210ENST00000473565 ATP2B3Q16720 1220 aa7.53□□□□□ -1.2
CLK1-210ENST00000473565 SNX14Q9Y5W7 946 aa7.53□□□□□ -1.2
CLK1-210ENST00000473565 EIF5BO60841 1220 aaKnown RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 RPS6KA4O75676 772 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 FAM196AQ6ZSG2 479 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 PAG1Q9NWQ8 432 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 CCDC171Q6TFL3 1326 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 TAF1LQ8IZX4 1826 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 KCNJ4P48050 445 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 ADCK5Q3MIX3 580 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 ZGPATQ8N5A5 531 aaKnown RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 RUFY2Q8WXA3 655 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 GPR108Q9NPR9 543 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 ZNF652Q9Y2D9 606 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 RTCBQ9Y3I0 505 aaKnown RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 ABCC12Q96J65 1359 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 ST18O60284 1047 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 KRT27Q7Z3Y8 459 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
CLK1-210ENST00000473565 RBM8AQ9Y5S9 174 aaKnown RBP7.52□□□□□ -1.21
CLK1-210ENST00000473565 ZPR1O75312 459 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 NARFQ9UHQ1 456 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 LY75O60449 1722 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 MED23Q9ULK4 1368 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 PDE8BO95263 885 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 ZAP70P43403 619 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 PHKA1P46020 1223 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 BCL11BQ9C0K0 894 aaPredicted RBP7.51□□□□□ -1.21
CLK1-210ENST00000473565 AKAP2Q9Y2D5 859 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 ZNF831Q5JPB2 1677 aa7.51□□□□□ -1.21
CLK1-210ENST00000473565 C4BP0C0L5 1744 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 DDIT3P35638 169 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CCDC152Q4G0S7 254 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 VPS53Q5VIR6 699 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 AK7Q96M32 723 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 TCEANC2Q96MN5 208 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CHMP5Q9NZZ3 219 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 MYO5AQ9Y4I1 1855 aaKnown RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 SCN7AQ01118 1682 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CASZ1Q86V15 1759 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 A0A0G2JLW4 131 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CASTP20810 708 aaKnown RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 MCAMP43121 646 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 PKP1Q13835 747 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 RC3H1Q5TC82 1133 aaKnown RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 CLEC4GQ6UXB4 293 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 JAKMIP1Q96N16 626 aaKnown RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 SETDB2Q96T68 719 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 HIP1O00291 1037 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 RFC4P35249 363 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 ANAPC15P60006 121 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 NECTIN1Q15223 517 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 MAP4K1Q92918 833 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 TMX3Q96JJ7 454 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
CLK1-210ENST00000473565 C4AP0C0L4 1744 aa7.5□□□□□ -1.21
CLK1-210ENST00000473565 SLC27A2O14975 620 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 CELF1Q92879 486 aaKnown RBP7.49□□□□□ -1.21
CLK1-210ENST00000473565 AKAP11Q9UKA4 1901 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 LRP5O75197 1615 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 M0R2C6 588 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 SSFA2P28290 1259 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
CLK1-210ENST00000473565 TRAPPC3LQ5T215 181 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 FOXD4L5Q5VV16 416 aaPredicted RBP7.49□□□□□ -1.21
CLK1-210ENST00000473565 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
CLK1-210ENST00000473565 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
CLK1-210ENST00000473565 NPHP1O15259 732 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 AK2P54819 239 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 CHRNDQ07001 517 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 PUM3Q15397 648 aaKnown RBP7.48□□□□□ -1.21
CLK1-210ENST00000473565 MCMDC2Q4G0Z9 681 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 PROM2Q8N271 834 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 OSBP2Q969R2 916 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 MAST3O60307 1309 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 LAMB2P55268 1798 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 LARGE1O95461 756 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
CLK1-210ENST00000473565 BCAMP50895 628 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 NFIXQ14938 502 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 WASHC4Q2M389 1173 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
CLK1-210ENST00000473565 CHAMP1Q96JM3 812 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 PIH1D3Q9NQM4 214 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms