RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 CCDC102BQ68D86 513 aa18.31■□□□□ 0.52
NPIPA1-203ENST00000472413 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
NPIPA1-203ENST00000472413 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
NPIPA1-203ENST00000472413 IDEP14735 1019 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 PATL2C9JE40 543 aaKnown RBP18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 RMND1Q9NWS8 449 aa18.3■□□□□ 0.52
NPIPA1-203ENST00000472413 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 FAM177A1Q8N128 213 aaPredicted RBP18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 CALML3P27482 149 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 LMOD1P29536 600 aaPredicted RBP18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
NPIPA1-203ENST00000472413 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 TFCP2Q12800 502 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 PDE8AO60658 829 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 YEATS4O95619 227 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 SSFA2P28290 1259 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 STX1AQ16623 288 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 C6orf50Q9HD87 102 aa18.28■□□□□ 0.52
NPIPA1-203ENST00000472413 MTIF2P46199 727 aaKnown RBP18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 CCDC40Q4G0X9 1142 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 USP37Q86T82 979 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 KCNG4Q8TDN1 519 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 SYCP3Q8IZU3 236 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 BICC1Q9H694 974 aaKnown RBP18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
NPIPA1-203ENST00000472413 EYA2O00167 538 aa18.27■□□□□ 0.51
NPIPA1-203ENST00000472413 SAMD9Q5K651 1589 aa18.27■□□□□ 0.51
NPIPA1-203ENST00000472413 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 MAGEB6Q8N7X4 407 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 TFIP11Q9UBB9 837 aaKnown RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 USP21Q9UK80 565 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 MAST3O60307 1309 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 UBE2HP62256 183 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 SMARCC2Q8TAQ2 1214 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 TNPO1Q92973 898 aaKnown RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 LARP6Q9BRS8 491 aaKnown RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 PRC1O43663 620 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 HELBQ8NG08 1087 aaPredicted RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 CWC15Q9P013 229 aaKnown RBP18.26■□□□□ 0.51
NPIPA1-203ENST00000472413 ZBTB40Q9NUA8 1239 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 NAPAP54920 295 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 RRP36Q96EU6 259 aaKnown RBP18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 NEMFO60524 1076 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 CHL1O00533 1208 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
NPIPA1-203ENST00000472413 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 KIF5CO60282 957 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 ZSCAN22P10073 491 aaPredicted RBP18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 Q6ZUG5 572 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 RAB11FIP4Q86YS3 637 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 NUP88Q99567 741 aaPredicted RBP18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 ITGA6P23229 1130 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 EXOC1Q9NV70 894 aa18.24■□□□□ 0.51
NPIPA1-203ENST00000472413 LIG1P18858 919 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 TCERG1LQ5VWI1 586 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 CCDC174Q6PII3 467 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 GGA1Q9UJY5 639 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 GSDMDP57764 484 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 SPDYE3A6NKU9 549 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 UFL1O94874 794 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
NPIPA1-203ENST00000472413 GNA11P29992 359 aa18.22■□□□□ 0.51
NPIPA1-203ENST00000472413 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1534.5 ms