RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ADARB2Q9NS39 739 aaKnown RBP11.53□□□□□ -0.56
USF1-204ENST00000472217 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 MKRN1Q9UHC7 482 aaKnown RBP11.53□□□□□ -0.56
USF1-204ENST00000472217 RTL9Q8NET4 1388 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 TMEM88BA6NKF7 163 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 ECE2O60344 883 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 UFL1O94874 794 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
USF1-204ENST00000472217 GREM2Q9H772 168 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 XDHP47989 1333 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
USF1-204ENST00000472217 SHTN1A0MZ66 631 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 F6X3S4 739 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 PSMD14O00487 310 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 CASP7P55210 303 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
USF1-204ENST00000472217 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
USF1-204ENST00000472217 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
USF1-204ENST00000472217 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
USF1-204ENST00000472217 TRAF5O00463 557 aa11.5□□□□□ -0.57
USF1-204ENST00000472217 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
USF1-204ENST00000472217 TRPM4Q8TD43 1214 aa11.5□□□□□ -0.57
USF1-204ENST00000472217 PLA2G12BQ9BX93 195 aa11.5□□□□□ -0.57
USF1-204ENST00000472217 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
USF1-204ENST00000472217 BSDC1Q9NW68 430 aaPredicted RBP11.5□□□□□ -0.57
USF1-204ENST00000472217 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
USF1-204ENST00000472217 PSME4Q14997 1843 aa11.49□□□□□ -0.57
USF1-204ENST00000472217 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
USF1-204ENST00000472217 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
USF1-204ENST00000472217 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
USF1-204ENST00000472217 BEND3Q5T5X7 828 aa11.49□□□□□ -0.57
USF1-204ENST00000472217 DPF2Q92785 391 aa11.49□□□□□ -0.57
USF1-204ENST00000472217 TRPM7Q96QT4 1865 aa11.49□□□□□ -0.57
USF1-204ENST00000472217 G3V3G9 751 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 H7C1D1 291 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 CSF1RP07333 972 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
USF1-204ENST00000472217 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
USF1-204ENST00000472217 ITGA6P23229 1130 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 RPS12P25398 132 aaKnown RBP11.48□□□□□ -0.57
USF1-204ENST00000472217 VEGFBP49765 207 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 PGAP2Q9UHJ9 254 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
USF1-204ENST00000472217 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 MED23Q9ULK4 1368 aa11.47□□□□□ -0.57
USF1-204ENST00000472217 RASSF10A6NK89 507 aa11.47□□□□□ -0.57
USF1-204ENST00000472217 EGFRP00533 1210 aa11.47□□□□□ -0.57
USF1-204ENST00000472217 VIL1P09327 827 aaKnown RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 CCT4P50991 539 aaKnown RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
USF1-204ENST00000472217 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 GLIS2Q9BZE0 524 aaPredicted RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 ABT1Q9ULW3 272 aaKnown RBP11.47□□□□□ -0.57
USF1-204ENST00000472217 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 ZNF609O15014 1411 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 E9PSI1 815 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 FOXO4P98177 505 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.57
USF1-204ENST00000472217 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 CST9Q5W186 159 aa11.46□□□□□ -0.57
USF1-204ENST00000472217 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.58
USF1-204ENST00000472217 ANKRD18BA2A2Z9 1011 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 GRM8O00222 908 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 DEFB115Q30KQ5 88 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 COL13A1Q5TAT6 717 aaPredicted RBP11.45□□□□□ -0.58
USF1-204ENST00000472217 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
USF1-204ENST00000472217 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
USF1-204ENST00000472217 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 SRCIN1Q9C0H9 1055 aa11.45□□□□□ -0.58
USF1-204ENST00000472217 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 CELF2O95319 508 aaKnown RBP11.44□□□□□ -0.58
USF1-204ENST00000472217 KLRK1P26718 216 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
USF1-204ENST00000472217 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
USF1-204ENST00000472217 KIF4BQ2VIQ3 1234 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 RBM26Q5T8P6 1007 aaKnown RBP11.44□□□□□ -0.58
USF1-204ENST00000472217 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 CDC37L1Q7L3B6 337 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 PODNQ7Z5L7 613 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 TXNRD3Q86VQ6 643 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 AGBL3Q8NEM8 1001 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
USF1-204ENST00000472217 LEMD3Q9Y2U8 911 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
USF1-204ENST00000472217 ZNF804BA4D1E1 1349 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 WDR33Q9C0J8 1336 aaKnown RBP11.43□□□□□ -0.58
USF1-204ENST00000472217 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms