RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 ECE2O60344 883 aa9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 GPR101Q96P66 508 aaPredicted RBP9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 GREM2Q9H772 168 aa9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 BSDC1Q9NW68 430 aaPredicted RBP9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 CNOT7Q9UIV1 285 aaKnown RBP9.14□□□□□ -0.95
SNRPD3-205ENST00000468770 F6X3S4 739 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 PSMD14O00487 310 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 ATP2B4P23634 1241 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 IGHMBP2P38935 993 aaKnown RBP9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 DPF2Q92785 391 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 ZBTB12Q9Y330 459 aaPredicted RBP9.13□□□□□ -0.95
SNRPD3-205ENST00000468770 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 ZNF521Q96K83 1311 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 LRRC37AA6NMS7 1700 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 E9PSI1 815 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 CSF1RP07333 972 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 ITGA6P23229 1130 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 CASP7P55210 303 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 SLC4A10Q6U841 1118 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 ZC3H15Q8WU90 426 aaKnown RBP9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 ABT1Q9ULW3 272 aaKnown RBP9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 COL4A1P02462 1669 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
SNRPD3-205ENST00000468770 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 VIL1P09327 827 aaKnown RBP9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 DEFB115Q30KQ5 88 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 SAMD7Q7Z3H4 446 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 ANKRD2Q9GZV1 360 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 C9orf78Q9NZ63 289 aaPredicted RBP9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 PGAP2Q9UHJ9 254 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 ADAMTSL1Q8N6G6 1762 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 CNTNAP1P78357 1384 aa9.11□□□□□ -0.95
SNRPD3-205ENST00000468770 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 CCER2I3L3R5 266 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 GRM8O00222 908 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 TRAF5O00463 557 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 ALDH1L1O75891 902 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 VEGFBP49765 207 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 CCT4P50991 539 aaKnown RBP9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 IFIT5Q13325 482 aaKnown RBP9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 TBC1D10BQ4KMP7 808 aaPredicted RBP9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 CDC37L1Q7L3B6 337 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 TRPM4Q8TD43 1214 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
SNRPD3-205ENST00000468770 USP17L3A6NCW0 530 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 USP17L4A6NCW7 530 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 WTIPA6NIX2 430 aaPredicted RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 RASSF10A6NK89 507 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 CELF2O95319 508 aaKnown RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 HSPA1AP0DMV8 641 aaKnown RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 HSPA1BP0DMV9 641 aaKnown RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 KCNJ4P48050 445 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 FOXO4P98177 505 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 CCDC57Q2TAC2 916 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 CST9Q5W186 159 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 LMBR1LQ6UX01 489 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 USP17L1Q7RTZ2 530 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 GLIS2Q9BZE0 524 aaPredicted RBP9.09□□□□□ -0.95
SNRPD3-205ENST00000468770 PCNTO95613 3336 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 MYH3P11055 1940 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 CHRNDQ07001 517 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 TAF7LQ5H9L4 462 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 USP48Q86UV5 1035 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 DCPSQ96C86 337 aaKnown RBP9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 CDCA7LQ96GN5 454 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 COA1Q9GZY4 146 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 MED23Q9ULK4 1368 aa9.08□□□□□ -0.96
SNRPD3-205ENST00000468770 PTPRCP08575 1304 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 WDR33Q9C0J8 1336 aaKnown RBP9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 TAF5LO75529 589 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 EGFRP00533 1210 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 ECE1P42892 770 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 GRM1Q13255 1194 aa9.07□□□□□ -0.96
SNRPD3-205ENST00000468770 KIF4BQ2VIQ3 1234 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms