RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RNF144AP50876 292 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 RBL2Q08999 1139 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 BMS1Q14692 1282 aaKnown RBP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 IER5Q5VY09 327 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 XKR5Q6UX68 686 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 MCF2L2Q86YR7 1114 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 CKAP2LQ8IYA6 745 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 SCARF2Q96GP6 870 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 TSEN34Q9BSV6 310 aaKnown RBP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 SPON2Q9BUD6 331 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 COL25A1Q9BXS0 654 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 EHD4Q9H223 541 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 TMEM63CQ9P1W3 806 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 F6X3S4 739 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 EREGO14944 169 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 CLSTN1O94985 981 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 VSIG8P0DPA2 414 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 ATF4P18848 351 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 GSTT1P30711 240 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 INPP5BP32019 993 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 ST13P50502 369 aaKnown RBP5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 TRIP4Q15650 581 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 C1orf127Q8N9H9 656 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 PMEPA1Q969W9 287 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 KLRG1Q96E93 195 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 OSBPL2Q9H1P3 480 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 KBTBD4Q9NVX7 518 aa5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 DMGDHQ9UI17 866 aaKnown RBP5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P25-201ENST00000468402 GBP2P32456 591 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 CCDC85BQ15834 202 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 ZNF662Q6ZS27 426 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 PODNQ7Z5L7 613 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 KIAA0825Q8IV33 1275 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 CPLX3Q8WVH0 158 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 MRFAP1L1Q96HT8 127 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 KLF16Q9BXK1 252 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 PIF1Q9H611 641 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 TIMMDC1Q9NPL8 285 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 ABI2Q9NYB9 513 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 AKAP2Q9Y2D5 859 aa5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 GPC6Q9Y625 555 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P25-201ENST00000468402 A0A1W2PNR3 127 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 TTLL8A6PVC2 850 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 RHOQP17081 205 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 CTSOP43234 321 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 GJA8P48165 433 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 FCGRTP55899 365 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 PWP1Q13610 501 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 GRM2Q14416 872 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 NFE2L2Q16236 605 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 MAP3K11Q16584 847 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 SDE2Q6IQ49 451 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 KANK3Q6NY19 840 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 NLRP13Q86W25 1043 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 MEIOBQ8N635 442 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 C7orf43Q8WVR3 580 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 ZIC5Q96T25 663 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 SUV39H2Q9H5I1 410 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 ENAMQ9NRM1 1142 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 CNTN3Q9P232 1028 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 TRAK1Q9UPV9 953 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 KCNMB2Q9Y691 235 aa5.38□□□□□ -1.55
HMGB1P25-201ENST00000468402 PHF20L1A8MW92 1017 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 U2SURPO15042 1029 aaKnown RBP5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 FGRP09769 529 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 MSX1P28360 303 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 NASPP49321 788 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 ERMP1Q7Z2K6 904 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 LYSMD3Q7Z3D4 306 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 KRT25Q7Z3Z0 450 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 PGBD3Q8N328 593 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 TRIM55Q9BYV6 548 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 GPAMQ9HCL2 828 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 KANSL3Q9P2N6 904 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 DNMT3LQ9UJW3 386 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 EFR3BQ9Y2G0 817 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
HMGB1P25-201ENST00000468402 A0A1B0GTH6 734 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SPATA31C2B4DYI2 1134 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 MSTNO14793 375 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SPINT1O43278 529 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SASH3O75995 380 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 EDN3P14138 238 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 PTSQ03393 145 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SV2AQ7L0J3 742 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 VWA5B2Q8N398 1253 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SEC16BQ96JE7 1060 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 RSRP1Q9BUV0 290 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 NOC4LQ9BVI4 516 aaKnown RBP5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 BRD7Q9NPI1 651 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 SBNO2Q9Y2G9 1366 aa5.36□□□□□ -1.55
HMGB1P25-201ENST00000468402 K7ELQ4 463 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 FBXO24O75426 580 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 ATP4AP20648 1035 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms