RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SLC51AQ86UW1 340 aa24.26■■□□□ 1.47
USP11-205ENST00000467378 CCDC191Q8NCU4 936 aa24.26■■□□□ 1.47
USP11-205ENST00000467378 AOC3Q16853 763 aa24.25■■□□□ 1.47
USP11-205ENST00000467378 RBM17Q96I25 401 aaKnown RBP24.25■■□□□ 1.47
USP11-205ENST00000467378 TRMT112Q9UI30 125 aaKnown RBP24.25■■□□□ 1.47
USP11-205ENST00000467378 DDX60Q8IY21 1712 aaKnown RBP24.24■■□□□ 1.47
USP11-205ENST00000467378 AKAP11Q9UKA4 1901 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 NEURL1BA8MQ27 555 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 SOX10P56693 466 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 CWF19L2Q2TBE0 894 aaKnown RBP24.24■■□□□ 1.47
USP11-205ENST00000467378 BEND3Q5T5X7 828 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 TMX4Q9H1E5 349 aaPredicted RBP24.24■■□□□ 1.47
USP11-205ENST00000467378 CWC25Q9NXE8 425 aaPredicted RBP24.24■■□□□ 1.47
USP11-205ENST00000467378 LAMB2P55268 1798 aa24.24■■□□□ 1.47
USP11-205ENST00000467378 GMPSP49915 693 aaPredicted RBP24.23■■□□□ 1.47
USP11-205ENST00000467378 NOGQ13253 232 aa24.23■■□□□ 1.47
USP11-205ENST00000467378 SLC10A5Q5PT55 438 aa24.23■■□□□ 1.47
USP11-205ENST00000467378 ARHGAP45Q92619 1136 aa24.23■■□□□ 1.47
USP11-205ENST00000467378 CRAMP1Q96RY5 1269 aa24.23■■□□□ 1.47
USP11-205ENST00000467378 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
USP11-205ENST00000467378 KIF16BQ96L93 1317 aa24.22■■□□□ 1.47
USP11-205ENST00000467378 CXCL9Q07325 125 aa24.22■■□□□ 1.47
USP11-205ENST00000467378 ZIC5Q96T25 663 aa24.22■■□□□ 1.47
USP11-205ENST00000467378 SH3TC1Q8TE82 1336 aa24.21■■□□□ 1.47
USP11-205ENST00000467378 SLC4A10Q6U841 1118 aa24.21■■□□□ 1.47
USP11-205ENST00000467378 ZBTB38Q8NAP3 1195 aaPredicted RBP24.21■■□□□ 1.47
USP11-205ENST00000467378 FAM89AQ96GI7 184 aa24.21■■□□□ 1.47
USP11-205ENST00000467378 PGAP2Q9UHJ9 254 aa24.21■■□□□ 1.47
USP11-205ENST00000467378 ZNRF3Q9ULT6 936 aa24.21■■□□□ 1.47
USP11-205ENST00000467378 POLR2AP24928 1970 aaKnown RBP24.21■■□□□ 1.47
USP11-205ENST00000467378 PCCAP05165 728 aaPredicted RBP24.2■■□□□ 1.46
USP11-205ENST00000467378 CDC37L1Q7L3B6 337 aa24.2■■□□□ 1.46
USP11-205ENST00000467378 HUNKP57058 714 aa24.19■■□□□ 1.46
USP11-205ENST00000467378 GCKRQ14397 625 aa24.19■■□□□ 1.46
USP11-205ENST00000467378 ZC3H15Q8WU90 426 aaKnown RBP24.19■■□□□ 1.46
USP11-205ENST00000467378 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
USP11-205ENST00000467378 VPS33BQ9H267 617 aa24.19■■□□□ 1.46
USP11-205ENST00000467378 FRAT1Q92837 279 aaPredicted RBP24.18■■□□□ 1.46
USP11-205ENST00000467378 SRCIN1Q9C0H9 1055 aa24.18■■□□□ 1.46
USP11-205ENST00000467378 RCAN3Q9UKA8 241 aa24.18■■□□□ 1.46
USP11-205ENST00000467378 H7C1W4 665 aa24.17■■□□□ 1.46
USP11-205ENST00000467378 IPO8O15397 1037 aaKnown RBP24.17■■□□□ 1.46
USP11-205ENST00000467378 ALDH1L1O75891 902 aa24.17■■□□□ 1.46
USP11-205ENST00000467378 HIRAP54198 1017 aaPredicted RBP24.17■■□□□ 1.46
USP11-205ENST00000467378 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
USP11-205ENST00000467378 SUPT20HQ8NEM7 779 aa24.17■■□□□ 1.46
USP11-205ENST00000467378 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
USP11-205ENST00000467378 CDHR2Q9BYE9 1310 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 MYH3P11055 1940 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 HCLS1P14317 486 aaPredicted RBP24.16■■□□□ 1.46
USP11-205ENST00000467378 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 USP48Q86UV5 1035 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 TRPM4Q8TD43 1214 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 ATP6V0A2Q9Y487 856 aa24.16■■□□□ 1.46
USP11-205ENST00000467378 IRS4O14654 1257 aaPredicted RBP24.15■■□□□ 1.46
USP11-205ENST00000467378 RAD17O75943 681 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 TRIM27P14373 513 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 TNIP1Q15025 636 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 PRPF38BQ5VTL8 546 aaKnown RBP24.15■■□□□ 1.46
USP11-205ENST00000467378 ZKSCAN2Q63HK3 967 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 ATF7IPQ6VMQ6 1270 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 NLRP3Q96P20 1036 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 TNNQ9UQP3 1299 aa24.15■■□□□ 1.46
USP11-205ENST00000467378 CASP7P55210 303 aa24.14■■□□□ 1.45
USP11-205ENST00000467378 RGMBQ6NW40 437 aa24.13■■□□□ 1.45
USP11-205ENST00000467378 SAGE1Q9NXZ1 904 aa24.13■■□□□ 1.45
USP11-205ENST00000467378 CNOT7Q9UIV1 285 aaKnown RBP24.13■■□□□ 1.45
USP11-205ENST00000467378 ABCC4O15439 1325 aa24.12■■□□□ 1.45
USP11-205ENST00000467378 H7C1D1 291 aa24.12■■□□□ 1.45
USP11-205ENST00000467378 DLK2Q6UY11 383 aa24.12■■□□□ 1.45
USP11-205ENST00000467378 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
USP11-205ENST00000467378 TAF1P21675 1872 aa24.12■■□□□ 1.45
USP11-205ENST00000467378 SHTN1A0MZ66 631 aa24.11■■□□□ 1.45
USP11-205ENST00000467378 TRPA1O75762 1119 aa24.11■■□□□ 1.45
USP11-205ENST00000467378 CCT4P50991 539 aaKnown RBP24.11■■□□□ 1.45
USP11-205ENST00000467378 KIF23Q02241 960 aaPredicted RBP24.11■■□□□ 1.45
USP11-205ENST00000467378 UBE3BQ7Z3V4 1068 aa24.11■■□□□ 1.45
USP11-205ENST00000467378 RTFDC1Q9BY42 306 aaPredicted RBP24.11■■□□□ 1.45
USP11-205ENST00000467378 FAM155AB1AL88 458 aaPredicted RBP24.1■■□□□ 1.45
USP11-205ENST00000467378 GRM8O00222 908 aa24.1■■□□□ 1.45
USP11-205ENST00000467378 PDE8AO60658 829 aa24.1■■□□□ 1.45
USP11-205ENST00000467378 SF3B3Q15393 1217 aaKnown RBP24.1■■□□□ 1.45
USP11-205ENST00000467378 INTS3Q68E01 1043 aaKnown RBP24.1■■□□□ 1.45
USP11-205ENST00000467378 MPNDQ8N594 471 aa24.1■■□□□ 1.45
USP11-205ENST00000467378 UTYO14607 1347 aa24.1■■□□□ 1.45
USP11-205ENST00000467378 HSP90B1P14625 803 aaKnown RBP24.09■■□□□ 1.45
USP11-205ENST00000467378 KIAA2012Q0VF49 1180 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 MICALL2Q8IY33 904 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 C2orf69Q8N8R5 385 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 CCDC102AQ96A19 550 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 CLUAP1Q96AJ1 413 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 GBA2Q9HCG7 927 aaPredicted RBP24.09■■□□□ 1.45
USP11-205ENST00000467378 RNF186Q9NXI6 227 aa24.09■■□□□ 1.45
USP11-205ENST00000467378 C9orf78Q9NZ63 289 aaPredicted RBP24.09■■□□□ 1.45
USP11-205ENST00000467378 ZNF157P51786 506 aaPredicted RBP24.08■■□□□ 1.45
USP11-205ENST00000467378 PLA2G12BQ9BX93 195 aa24.08■■□□□ 1.45
USP11-205ENST00000467378 USP44Q9H0E7 712 aa24.08■■□□□ 1.45
USP11-205ENST00000467378 NBPF7P0C2Y1 421 aaPredicted RBP24.07■■□□□ 1.44
USP11-205ENST00000467378 SP8Q8IXZ3 490 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms