RNA–Protein interactions for RNA: ENST00000465369.5

EDEM1-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 5

Gene EDEM1, Length 1,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-206ENST00000465369 SKOR2Q2VWA4 1001 aaPredicted RBP28.35■■■□□ 2.13
EDEM1-206ENST00000465369 TSGA10IPQ3SY00 556 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 RUFY3Q7L099 469 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 XAGE2Q96GT9 111 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 HELLSQ9NRZ9 838 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 MYH3P11055 1940 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 BAG4O95429 457 aaKnown RBP28.35■■■□□ 2.13
EDEM1-206ENST00000465369 ADCK5Q3MIX3 580 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 METTL24Q5JXM2 366 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 UTP14AQ9BVJ6 771 aaKnown RBP28.35■■■□□ 2.13
EDEM1-206ENST00000465369 PDRG1Q9NUG6 133 aa28.35■■■□□ 2.13
EDEM1-206ENST00000465369 LRRFIP1Q32MZ4 808 aaKnown RBP28.34■■■□□ 2.13
EDEM1-206ENST00000465369 TTC39AQ5SRH9 613 aa28.34■■■□□ 2.13
EDEM1-206ENST00000465369 SUSD4Q5VX71 490 aa28.34■■■□□ 2.13
EDEM1-206ENST00000465369 CNNM1Q9NRU3 951 aa28.33■■■□□ 2.13
EDEM1-206ENST00000465369 USP21Q9UK80 565 aa28.33■■■□□ 2.13
EDEM1-206ENST00000465369 ABCC12Q96J65 1359 aa28.33■■■□□ 2.13
EDEM1-206ENST00000465369 RPAP1Q9BWH6 1393 aaPredicted RBP28.33■■■□□ 2.13
EDEM1-206ENST00000465369 RIC1Q4ADV7 1423 aa28.33■■■□□ 2.13
EDEM1-206ENST00000465369 PKP1Q13835 747 aa28.32■■■□□ 2.12
EDEM1-206ENST00000465369 ATP2B3Q16720 1220 aa28.32■■■□□ 2.12
EDEM1-206ENST00000465369 ZNF652Q9Y2D9 606 aa28.32■■■□□ 2.12
EDEM1-206ENST00000465369 U3KPZ7 1027 aaPredicted RBP28.32■■■□□ 2.12
EDEM1-206ENST00000465369 ZSCAN31Q96LW9 406 aaPredicted RBP28.31■■■□□ 2.12
EDEM1-206ENST00000465369 KRT32Q14532 448 aa28.31■■■□□ 2.12
EDEM1-206ENST00000465369 MYH14Q7Z406 1995 aaKnown RBP28.3■■■□□ 2.12
EDEM1-206ENST00000465369 CLEC4GQ6UXB4 293 aa28.3■■■□□ 2.12
EDEM1-206ENST00000465369 COL5A3P25940 1745 aaPredicted RBP28.3■■■□□ 2.12
EDEM1-206ENST00000465369 ADORA1P30542 326 aa28.3■■■□□ 2.12
EDEM1-206ENST00000465369 ZMYM1Q5SVZ6 1142 aa28.3■■■□□ 2.12
EDEM1-206ENST00000465369 SH2B1Q9NRF2 756 aaPredicted RBP28.3■■■□□ 2.12
EDEM1-206ENST00000465369 ZDHHC9Q9Y397 364 aa28.3■■■□□ 2.12
EDEM1-206ENST00000465369 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.29■■■□□ 2.12
EDEM1-206ENST00000465369 RNF113AO15541 343 aaKnown RBP28.28■■■□□ 2.12
EDEM1-206ENST00000465369 CPA1P15085 419 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 VGLL2Q8N8G2 317 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 ALDH8A1Q9H2A2 487 aaPredicted RBP28.28■■■□□ 2.12
EDEM1-206ENST00000465369 NIP7Q9Y221 180 aaKnown RBP eCLIP28.28■■■□□ 2.12
EDEM1-206ENST00000465369 MROH5Q6ZUA9 1318 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 RGL2O15211 777 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 PDE8BO95263 885 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 BLOC1S2Q6QNY1 142 aa28.28■■■□□ 2.12
EDEM1-206ENST00000465369 ZNF512BQ96KM6 892 aaPredicted RBP28.28■■■□□ 2.12
EDEM1-206ENST00000465369 SEC62Q99442 399 aaKnown RBP28.28■■■□□ 2.12
EDEM1-206ENST00000465369 BRD1O95696 1058 aa28.27■■■□□ 2.12
EDEM1-206ENST00000465369 FKBP4Q02790 459 aaKnown RBP eCLIP28.27■■■□□ 2.12
EDEM1-206ENST00000465369 CNTNAP4Q9C0A0 1308 aa28.27■■■□□ 2.12
EDEM1-206ENST00000465369 ZFYP08048 801 aaPredicted RBP28.26■■■□□ 2.11
EDEM1-206ENST00000465369 ANKRD1Q15327 319 aa28.26■■■□□ 2.11
EDEM1-206ENST00000465369 DSCC1Q9BVC3 393 aa28.26■■■□□ 2.11
EDEM1-206ENST00000465369 CCDC129Q6ZRS4 1044 aa28.26■■■□□ 2.11
EDEM1-206ENST00000465369 LINC00116Q8NCU8 138 aa28.26■■■□□ 2.11
EDEM1-206ENST00000465369 NTSR2O95665 410 aa28.25■■■□□ 2.11
EDEM1-206ENST00000465369 HCLS1P14317 486 aaPredicted RBP28.25■■■□□ 2.11
EDEM1-206ENST00000465369 LRP5O75197 1615 aa28.25■■■□□ 2.11
EDEM1-206ENST00000465369 CHGBP05060 677 aa28.24■■■□□ 2.11
EDEM1-206ENST00000465369 CCDC152Q4G0S7 254 aa28.24■■■□□ 2.11
EDEM1-206ENST00000465369 THSD7AQ9UPZ6 1657 aa28.24■■■□□ 2.11
EDEM1-206ENST00000465369 RPS6KB1P23443 525 aa28.24■■■□□ 2.11
EDEM1-206ENST00000465369 RTL9Q8NET4 1388 aa28.24■■■□□ 2.11
EDEM1-206ENST00000465369 FAM177BA6PVY3 158 aa28.22■■■□□ 2.11
EDEM1-206ENST00000465369 RC3H1Q5TC82 1133 aaKnown RBP28.22■■■□□ 2.11
EDEM1-206ENST00000465369 MCTP1Q6DN14 999 aa28.22■■■□□ 2.11
EDEM1-206ENST00000465369 PUM3Q15397 648 aaKnown RBP28.22■■■□□ 2.11
EDEM1-206ENST00000465369 LPIN2Q92539 896 aa28.21■■■□□ 2.11
EDEM1-206ENST00000465369 MPHOSPH8Q99549 860 aa28.21■■■□□ 2.11
EDEM1-206ENST00000465369 WDR33Q9C0J8 1336 aaKnown RBP28.21■■■□□ 2.11
EDEM1-206ENST00000465369 BCORQ6W2J9 1755 aa28.21■■■□□ 2.11
EDEM1-206ENST00000465369 ZAP70P43403 619 aa28.2■■■□□ 2.11
EDEM1-206ENST00000465369 CERKQ8TCT0 537 aa28.2■■■□□ 2.11
EDEM1-206ENST00000465369 NEK1Q96PY6 1258 aa28.2■■■□□ 2.11
EDEM1-206ENST00000465369 MAST3O60307 1309 aa28.2■■■□□ 2.11
EDEM1-206ENST00000465369 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
EDEM1-206ENST00000465369 LARP6Q9BRS8 491 aaKnown RBP28.2■■■□□ 2.1
EDEM1-206ENST00000465369 SMC3Q9UQE7 1217 aa28.2■■■□□ 2.1
EDEM1-206ENST00000465369 CYP21A2P08686 494 aa28.19■■■□□ 2.1
EDEM1-206ENST00000465369 UQCRFS1P1P0C7P4 283 aa28.19■■■□□ 2.1
EDEM1-206ENST00000465369 SCARF1Q14162 830 aa28.19■■■□□ 2.1
EDEM1-206ENST00000465369 TTF1Q15361 905 aaPredicted RBP28.19■■■□□ 2.1
EDEM1-206ENST00000465369 GJD4Q96KN9 370 aaPredicted RBP28.19■■■□□ 2.1
EDEM1-206ENST00000465369 GZF1Q9H116 711 aaPredicted RBP28.19■■■□□ 2.1
EDEM1-206ENST00000465369 FGFR2P21802 821 aa28.19■■■□□ 2.1
EDEM1-206ENST00000465369 TAF6LQ9Y6J9 622 aa28.19■■■□□ 2.1
EDEM1-206ENST00000465369 LARGE1O95461 756 aa28.18■■■□□ 2.1
EDEM1-206ENST00000465369 HSPD1P10809 573 aaKnown RBP28.18■■■□□ 2.1
EDEM1-206ENST00000465369 IGHMBP2P38935 993 aaKnown RBP28.18■■■□□ 2.1
EDEM1-206ENST00000465369 KLHL40Q2TBA0 621 aa28.18■■■□□ 2.1
EDEM1-206ENST00000465369 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.18■■■□□ 2.16e-7■■■□□ 15.9
EDEM1-206ENST00000465369 HMGB1P09429 215 aaKnown RBP28.17■■■□□ 2.1
EDEM1-206ENST00000465369 MCAMP43121 646 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 ME3Q16798 604 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 ZSCAN25Q6NSZ9 544 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 LAMB2P55268 1798 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 NHSQ6T4R5 1651 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 DDX60Q8IY21 1712 aaKnown RBP28.17■■■□□ 2.1
EDEM1-206ENST00000465369 ARID4AP29374 1257 aaPredicted RBP28.17■■■□□ 2.1
EDEM1-206ENST00000465369 TPCN1Q9ULQ1 816 aa28.17■■■□□ 2.1
EDEM1-206ENST00000465369 SLC5A1P13866 664 aa28.16■■■□□ 2.1
EDEM1-206ENST00000465369 SLFNL1Q499Z3 407 aa28.16■■■□□ 2.1
EDEM1-206ENST00000465369 L1TD1Q5T7N2 865 aaKnown RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms