RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZNF594Q96JF6 807 aaPredicted RBP22.27■■□□□ 1.16
VPS52-214ENST00000463486 DDNO94850 711 aaPredicted RBP22.26■■□□□ 1.15
VPS52-214ENST00000463486 IGHMBP2P38935 993 aaKnown RBP22.26■■□□□ 1.15
VPS52-214ENST00000463486 TMEM57Q8N5G2 664 aa22.26■■□□□ 1.15
VPS52-214ENST00000463486 GPR101Q96P66 508 aaPredicted RBP22.26■■□□□ 1.15
VPS52-214ENST00000463486 XDHP47989 1333 aa22.26■■□□□ 1.15
VPS52-214ENST00000463486 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
VPS52-214ENST00000463486 SPEF2Q9C093 1822 aa22.25■■□□□ 1.15
VPS52-214ENST00000463486 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
VPS52-214ENST00000463486 ANKIB1Q9P2G1 1089 aa22.25■■□□□ 1.15
VPS52-214ENST00000463486 CHMP3Q9Y3E7 222 aa22.25■■□□□ 1.15
VPS52-214ENST00000463486 C6orf229H3BNL8 230 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 WASHC4Q2M389 1173 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 CCDC57Q2TAC2 916 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 DPY19L2Q6NUT2 758 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 RRAGCQ9HB90 399 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
VPS52-214ENST00000463486 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 UFL1O94874 794 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
VPS52-214ENST00000463486 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
VPS52-214ENST00000463486 MPHOSPH8Q99549 860 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 GGA1Q9UJY5 639 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 ZNRF3Q9ULT6 936 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 WDR90Q96KV7 1748 aa22.23■■□□□ 1.15
VPS52-214ENST00000463486 ATP2B4P23634 1241 aa22.22■■□□□ 1.15
VPS52-214ENST00000463486 CHRNDQ07001 517 aa22.22■■□□□ 1.15
VPS52-214ENST00000463486 NIM1KQ8IY84 436 aa22.22■■□□□ 1.15
VPS52-214ENST00000463486 L3MBTL3Q96JM7 780 aaPredicted RBP22.22■■□□□ 1.15
VPS52-214ENST00000463486 PUS3Q9BZE2 481 aaKnown RBP22.22■■□□□ 1.15
VPS52-214ENST00000463486 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
VPS52-214ENST00000463486 RIMBP2O15034 1052 aa22.21■■□□□ 1.15
VPS52-214ENST00000463486 CXCL9Q07325 125 aa22.21■■□□□ 1.15
VPS52-214ENST00000463486 DZIP1LQ8IYY4 767 aaKnown RBP22.21■■□□□ 1.15
VPS52-214ENST00000463486 YTHDC1Q96MU7 727 aaKnown RBP22.21■■□□□ 1.15
VPS52-214ENST00000463486 RIPOR2Q9Y4F9 1068 aa22.21■■□□□ 1.15
VPS52-214ENST00000463486 IRS2Q9Y4H2 1338 aa22.21■■□□□ 1.15
VPS52-214ENST00000463486 LDHAL6AQ6ZMR3 332 aa22.2■■□□□ 1.14
VPS52-214ENST00000463486 GPC2Q8N158 579 aa22.2■■□□□ 1.14
VPS52-214ENST00000463486 EYA3Q99504 573 aa22.2■■□□□ 1.14
VPS52-214ENST00000463486 ANKRD2Q9GZV1 360 aa22.2■■□□□ 1.14
VPS52-214ENST00000463486 SNAP23O00161 211 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 GNAI3P08754 354 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 TXNRD3Q86VQ6 643 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 KLHDC4Q8TBB5 520 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 ZC3H12CQ9C0D7 883 aaKnown RBP22.19■■□□□ 1.14
VPS52-214ENST00000463486 KCNQ5Q9NR82 932 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 LEMD3Q9Y2U8 911 aa22.19■■□□□ 1.14
VPS52-214ENST00000463486 TAF5LO75529 589 aa22.18■■□□□ 1.14
VPS52-214ENST00000463486 VEGFAP15692 232 aaPredicted RBP22.18■■□□□ 1.14
VPS52-214ENST00000463486 KLRK1P26718 216 aa22.18■■□□□ 1.14
VPS52-214ENST00000463486 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
VPS52-214ENST00000463486 DOK7Q18PE1 504 aa22.18■■□□□ 1.14
VPS52-214ENST00000463486 HELBQ8NG08 1087 aaPredicted RBP22.18■■□□□ 1.14
VPS52-214ENST00000463486 PANK1Q8TE04 598 aa22.18■■□□□ 1.14
VPS52-214ENST00000463486 DBNDD1Q9H9R9 158 aa22.18■■□□□ 1.14
VPS52-214ENST00000463486 A0A1B0GUL6 1792 aa22.17■■□□□ 1.14
VPS52-214ENST00000463486 MED23Q9ULK4 1368 aa22.17■■□□□ 1.14
VPS52-214ENST00000463486 ZNF804BA4D1E1 1349 aa22.17■■□□□ 1.14
VPS52-214ENST00000463486 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
VPS52-214ENST00000463486 PLIN1O60240 522 aa22.17■■□□□ 1.14
VPS52-214ENST00000463486 PTPN12Q05209 780 aaKnown RBP22.17■■□□□ 1.14
VPS52-214ENST00000463486 MTX1Q13505 466 aa22.17■■□□□ 1.14
VPS52-214ENST00000463486 ECE2O60344 883 aa22.16■■□□□ 1.14
VPS52-214ENST00000463486 LRRC24Q50LG9 513 aa22.16■■□□□ 1.14
VPS52-214ENST00000463486 TAF7LQ5H9L4 462 aa22.16■■□□□ 1.14
VPS52-214ENST00000463486 HDAC5Q9UQL6 1122 aa22.16■■□□□ 1.14
VPS52-214ENST00000463486 RAD17O75943 681 aa22.15■■□□□ 1.14
VPS52-214ENST00000463486 C15orf52Q6ZUT6 534 aaKnown RBP22.15■■□□□ 1.14
VPS52-214ENST00000463486 FTSJ3Q8IY81 847 aaKnown RBP22.15■■□□□ 1.14
VPS52-214ENST00000463486 CNNM1Q9NRU3 951 aa22.15■■□□□ 1.14
VPS52-214ENST00000463486 SCN9AQ15858 1988 aa22.14■■□□□ 1.14
VPS52-214ENST00000463486 SCNN1DP51172 638 aa22.14■■□□□ 1.13
VPS52-214ENST00000463486 VGLL2Q8N8G2 317 aa22.14■■□□□ 1.13
VPS52-214ENST00000463486 GJA3Q9Y6H8 435 aa22.14■■□□□ 1.13
VPS52-214ENST00000463486 TOMM70O94826 608 aa22.13■■□□□ 1.13
VPS52-214ENST00000463486 GNAI2P04899 355 aa22.13■■□□□ 1.13
VPS52-214ENST00000463486 CIAPIN1Q6FI81 312 aa22.13■■□□□ 1.13
VPS52-214ENST00000463486 ATG9AQ7Z3C6 839 aa22.13■■□□□ 1.13
VPS52-214ENST00000463486 C1QTNF8P60827 252 aa22.12■■□□□ 1.13
VPS52-214ENST00000463486 ITPRIPQ8IWB1 547 aa22.12■■□□□ 1.13
VPS52-214ENST00000463486 TAF1DQ9H5J8 278 aaPredicted RBP22.12■■□□□ 1.13
VPS52-214ENST00000463486 COPRSQ9NQ92 184 aa22.12■■□□□ 1.13
VPS52-214ENST00000463486 SCN4AP35499 1836 aa22.12■■□□□ 1.13
VPS52-214ENST00000463486 MROH5Q6ZUA9 1318 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 EYA2O00167 538 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 PSMD14O00487 310 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 TNIP1Q15025 636 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 C20orf194Q5TEA3 1177 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 PODNQ7Z5L7 613 aa22.11■■□□□ 1.13
VPS52-214ENST00000463486 VIL1P09327 827 aaKnown RBP22.1■■□□□ 1.13
VPS52-214ENST00000463486 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
VPS52-214ENST00000463486 POTEJP0CG39 1038 aa22.1■■□□□ 1.13
VPS52-214ENST00000463486 GMPSP49915 693 aaPredicted RBP22.1■■□□□ 1.13
VPS52-214ENST00000463486 RBM46Q8TBY0 533 aaKnown RBP22.1■■□□□ 1.13
VPS52-214ENST00000463486 HACL1Q9UJ83 578 aa22.1■■□□□ 1.13
VPS52-214ENST00000463486 PA2G4Q9UQ80 394 aaKnown RBP22.1■■□□□ 1.13
VPS52-214ENST00000463486 PNMA6EA0A0J9YXQ4 647 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 IQCA1LA6NCM1 817 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 MS4A1P11836 297 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms