RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
SF1-212ENST00000463343 TNNQ9UQP3 1299 aa22.37■■□□□ 1.17
SF1-212ENST00000463343 CSF1RP07333 972 aa22.36■■□□□ 1.17
SF1-212ENST00000463343 NBPF7P0C2Y1 421 aaPredicted RBP22.36■■□□□ 1.17
SF1-212ENST00000463343 LMOD1P29536 600 aaPredicted RBP22.36■■□□□ 1.17
SF1-212ENST00000463343 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
SF1-212ENST00000463343 MAP1SQ66K74 1059 aaPredicted RBP22.36■■□□□ 1.17
SF1-212ENST00000463343 AIDAQ96BJ3 306 aa22.36■■□□□ 1.17
SF1-212ENST00000463343 USP44Q9H0E7 712 aa22.36■■□□□ 1.17
SF1-212ENST00000463343 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
SF1-212ENST00000463343 UTYO14607 1347 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 TRIM27P14373 513 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 RPS8P62241 208 aaKnown RBP22.35■■□□□ 1.17
SF1-212ENST00000463343 FOXO4P98177 505 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 EPHA10Q5JZY3 1008 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 SP8Q8IXZ3 490 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 LARGE2Q8N3Y3 721 aa22.35■■□□□ 1.17
SF1-212ENST00000463343 USP50Q70EL3 339 aaPredicted RBP22.34■■□□□ 1.17
SF1-212ENST00000463343 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
SF1-212ENST00000463343 GREM2Q9H772 168 aa22.34■■□□□ 1.17
SF1-212ENST00000463343 SCNN1DP51172 638 aa22.33■■□□□ 1.17
SF1-212ENST00000463343 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
SF1-212ENST00000463343 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
SF1-212ENST00000463343 KAZALD1Q96I82 304 aa22.33■■□□□ 1.17
SF1-212ENST00000463343 GJA3Q9Y6H8 435 aa22.33■■□□□ 1.17
SF1-212ENST00000463343 COL4A5P29400 1685 aa22.33■■□□□ 1.16
SF1-212ENST00000463343 TAF1P21675 1872 aa22.32■■□□□ 1.16
SF1-212ENST00000463343 MAP2K1Q02750 393 aaPredicted RBP22.32■■□□□ 1.16
SF1-212ENST00000463343 SUPT20HQ8NEM7 779 aa22.32■■□□□ 1.16
SF1-212ENST00000463343 SUCLG2Q96I99 432 aa22.32■■□□□ 1.16
SF1-212ENST00000463343 RTFDC1Q9BY42 306 aaPredicted RBP22.32■■□□□ 1.16
SF1-212ENST00000463343 COL4A1P02462 1669 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 EPS15P42566 896 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 TMC4Q7Z404 712 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 NIM1KQ8IY84 436 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 RCAN3Q9UKA8 241 aa22.31■■□□□ 1.16
SF1-212ENST00000463343 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
SF1-212ENST00000463343 LMBR1LQ6UX01 489 aa22.3■■□□□ 1.16
SF1-212ENST00000463343 WDR33Q9C0J8 1336 aaKnown RBP22.3■■□□□ 1.16
SF1-212ENST00000463343 LTBP1Q14766 1721 aa22.29■■□□□ 1.16
SF1-212ENST00000463343 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
SF1-212ENST00000463343 PPIP5K2O43314 1243 aa22.28■■□□□ 1.16
SF1-212ENST00000463343 ITGA6P23229 1130 aa22.28■■□□□ 1.16
SF1-212ENST00000463343 ANKRD18AQ8IVF6 992 aa22.28■■□□□ 1.16
SF1-212ENST00000463343 MPNDQ8N594 471 aa22.28■■□□□ 1.16
SF1-212ENST00000463343 CDC5LQ99459 802 aaKnown RBP22.28■■□□□ 1.16
SF1-212ENST00000463343 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
SF1-212ENST00000463343 ADARB2Q9NS39 739 aaKnown RBP22.27■■□□□ 1.16
SF1-212ENST00000463343 GPRC5DQ9NZD1 345 aa22.27■■□□□ 1.16
SF1-212ENST00000463343 ABT1Q9ULW3 272 aaKnown RBP22.27■■□□□ 1.16
SF1-212ENST00000463343 ECE1P42892 770 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 TMEM57Q8N5G2 664 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 ANKRD44Q8N8A2 993 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 BICC1Q9H694 974 aaKnown RBP22.26■■□□□ 1.15
SF1-212ENST00000463343 PGAP2Q9UHJ9 254 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 CHMP3Q9Y3E7 222 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 TRPM7Q96QT4 1865 aa22.26■■□□□ 1.15
SF1-212ENST00000463343 ANKRD18BA2A2Z9 1011 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 LBX1P52954 281 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 GPSM2P81274 684 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 CXCL9Q07325 125 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 AOC3Q16853 763 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 RABL6Q3YEC7 729 aaPredicted RBP22.25■■□□□ 1.15
SF1-212ENST00000463343 DPP8Q6V1X1 898 aaPredicted RBP22.25■■□□□ 1.15
SF1-212ENST00000463343 DZIP1LQ8IYY4 767 aaKnown RBP22.25■■□□□ 1.15
SF1-212ENST00000463343 MEIS3Q99687 375 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 BSDC1Q9NW68 430 aaPredicted RBP22.25■■□□□ 1.15
SF1-212ENST00000463343 MYH3P11055 1940 aa22.25■■□□□ 1.15
SF1-212ENST00000463343 RLBP1P12271 317 aa22.24■■□□□ 1.15
SF1-212ENST00000463343 IFIT5Q13325 482 aaKnown RBP22.24■■□□□ 1.15
SF1-212ENST00000463343 CST9Q5W186 159 aa22.24■■□□□ 1.15
SF1-212ENST00000463343 NSFL1CQ9UNZ2 370 aaKnown RBP22.24■■□□□ 1.15
SF1-212ENST00000463343 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
SF1-212ENST00000463343 HSPA8P11142 646 aaKnown RBP22.23■■□□□ 1.15
SF1-212ENST00000463343 KIAA2012Q0VF49 1180 aa22.23■■□□□ 1.15
SF1-212ENST00000463343 ZC3H15Q8WU90 426 aaKnown RBP22.23■■□□□ 1.15
SF1-212ENST00000463343 PLIN1O60240 522 aa22.22■■□□□ 1.15
SF1-212ENST00000463343 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
SF1-212ENST00000463343 TNIP1Q15025 636 aa22.22■■□□□ 1.15
SF1-212ENST00000463343 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
SF1-212ENST00000463343 CAPNS2Q96L46 248 aa22.22■■□□□ 1.15
SF1-212ENST00000463343 MINPP1Q9UNW1 487 aa22.22■■□□□ 1.15
SF1-212ENST00000463343 TLL2Q9Y6L7 1015 aa22.22■■□□□ 1.15
SF1-212ENST00000463343 MAP2K2P36507 400 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 CCDC57Q2TAC2 916 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 CIAPIN1Q6FI81 312 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 FTSJ3Q8IY81 847 aaKnown RBP22.21■■□□□ 1.15
SF1-212ENST00000463343 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 HHIPL1Q96JK4 782 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 PODXL2Q9NZ53 605 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 POLLQ9UGP5 575 aa22.21■■□□□ 1.15
SF1-212ENST00000463343 GNAI3P08754 354 aa22.2■■□□□ 1.14
SF1-212ENST00000463343 GPR101Q96P66 508 aaPredicted RBP22.2■■□□□ 1.14
SF1-212ENST00000463343 MPHOSPH8Q99549 860 aa22.2■■□□□ 1.14
SF1-212ENST00000463343 LRRFIP2Q9Y608 721 aaKnown RBP22.2■■□□□ 1.14
SF1-212ENST00000463343 THSD7BQ9C0I4 1608 aa22.2■■□□□ 1.14
SF1-212ENST00000463343 GMPSP49915 693 aaPredicted RBP22.19■■□□□ 1.14
SF1-212ENST00000463343 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.141e-11■□□□□ 9.6
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms