RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
SF3A3-204ENST00000462258 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
SF3A3-204ENST00000462258 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
SF3A3-204ENST00000462258 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
SF3A3-204ENST00000462258 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
SF3A3-204ENST00000462258 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 ECE2O60344 883 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 EPS15P42566 896 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 TNIP1Q15025 636 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
SF3A3-204ENST00000462258 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
SF3A3-204ENST00000462258 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
SF3A3-204ENST00000462258 USP50Q70EL3 339 aaPredicted RBP12.92□□□□□ -0.34
SF3A3-204ENST00000462258 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
SF3A3-204ENST00000462258 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
SF3A3-204ENST00000462258 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
SF3A3-204ENST00000462258 ITGA6P23229 1130 aa12.91□□□□□ -0.34
SF3A3-204ENST00000462258 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
SF3A3-204ENST00000462258 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
SF3A3-204ENST00000462258 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
SF3A3-204ENST00000462258 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
SF3A3-204ENST00000462258 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
SF3A3-204ENST00000462258 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
SF3A3-204ENST00000462258 PCNTO95613 3336 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 ZNF609O15014 1411 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 GRM8O00222 908 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 PSMD14O00487 310 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 ITGBL1O95965 494 aaPredicted RBP12.9□□□□□ -0.34
SF3A3-204ENST00000462258 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 CNTROBQ8N137 903 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
SF3A3-204ENST00000462258 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
SF3A3-204ENST00000462258 PTPRCP08575 1304 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 G3V3G9 751 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 CSF1RP07333 972 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 MICALL2Q8IY33 904 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
SF3A3-204ENST00000462258 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
SF3A3-204ENST00000462258 ANKRD18BA2A2Z9 1011 aa12.88□□□□□ -0.35
SF3A3-204ENST00000462258 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
SF3A3-204ENST00000462258 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
SF3A3-204ENST00000462258 FOXO4P98177 505 aa12.88□□□□□ -0.35
SF3A3-204ENST00000462258 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
SF3A3-204ENST00000462258 MPHOSPH8Q99549 860 aa12.88□□□□□ -0.35
SF3A3-204ENST00000462258 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
SF3A3-204ENST00000462258 THSD7BQ9C0I4 1608 aa12.88□□□□□ -0.35
SF3A3-204ENST00000462258 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
SF3A3-204ENST00000462258 DPF2Q92785 391 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 SMC4Q9NTJ3 1288 aa12.87□□□□□ -0.35
SF3A3-204ENST00000462258 MKRN1Q9UHC7 482 aaKnown RBP12.87□□□□□ -0.35
SF3A3-204ENST00000462258 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
SF3A3-204ENST00000462258 ARAP2Q8WZ64 1704 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 H7C1D1 291 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
SF3A3-204ENST00000462258 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
SF3A3-204ENST00000462258 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
SF3A3-204ENST00000462258 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-204ENST00000462258 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
SF3A3-204ENST00000462258 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-204ENST00000462258 KCNJ4P48050 445 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 CHRNDQ07001 517 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 UTYO14607 1347 aa12.85□□□□□ -0.35
SF3A3-204ENST00000462258 TRAF5O00463 557 aa12.84□□□□□ -0.35
SF3A3-204ENST00000462258 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
SF3A3-204ENST00000462258 KLRK1P26718 216 aa12.84□□□□□ -0.35
SF3A3-204ENST00000462258 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
SF3A3-204ENST00000462258 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.353e-11■■■■■ 43.1
SF3A3-204ENST00000462258 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
SF3A3-204ENST00000462258 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
SF3A3-204ENST00000462258 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
SF3A3-204ENST00000462258 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
SF3A3-204ENST00000462258 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.35
SF3A3-204ENST00000462258 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 EGFRP00533 1210 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 KIF4BQ2VIQ3 1234 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 MIER1Q8N108 512 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms