RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 RASAL3Q86YV0 1011 aa15.61■□□□□ 0.09
HCFC1-204ENST00000461098 CDCA5Q96FF9 252 aa15.61■□□□□ 0.09
HCFC1-204ENST00000461098 HPS5Q9UPZ3 1129 aa15.61■□□□□ 0.09
HCFC1-204ENST00000461098 CENPFP49454 3210 aa15.6■□□□□ 0.09
HCFC1-204ENST00000461098 TBC1D16Q8TBP0 767 aa15.6■□□□□ 0.09
HCFC1-204ENST00000461098 FAM89AQ96GI7 184 aa15.6■□□□□ 0.09
HCFC1-204ENST00000461098 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
HCFC1-204ENST00000461098 BRCA2P51587 3418 aa15.59■□□□□ 0.09
HCFC1-204ENST00000461098 C6orf229H3BNL8 230 aa15.59■□□□□ 0.09
HCFC1-204ENST00000461098 KRT24Q2M2I5 525 aa15.59■□□□□ 0.09
HCFC1-204ENST00000461098 SULF1Q8IWU6 871 aa15.59■□□□□ 0.09
HCFC1-204ENST00000461098 ISCA1Q9BUE6 129 aa15.59■□□□□ 0.09
HCFC1-204ENST00000461098 ZNF280AP59817 542 aaPredicted RBP15.58■□□□□ 0.08
HCFC1-204ENST00000461098 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
HCFC1-204ENST00000461098 ZNF609O15014 1411 aa15.58■□□□□ 0.08
HCFC1-204ENST00000461098 ANGEL2Q5VTE6 544 aaKnown RBP15.57■□□□□ 0.08
HCFC1-204ENST00000461098 EYA3Q99504 573 aa15.57■□□□□ 0.08
HCFC1-204ENST00000461098 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
HCFC1-204ENST00000461098 PAPPA2Q9BXP8 1791 aa15.57■□□□□ 0.08
HCFC1-204ENST00000461098 PSME4Q14997 1843 aa15.57■□□□□ 0.08
HCFC1-204ENST00000461098 RIPK4P57078 832 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 SCARF1Q14162 830 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 MOB2Q70IA6 237 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 ZNF296Q8WUU4 475 aaPredicted RBP15.56■□□□□ 0.08
HCFC1-204ENST00000461098 GMLQ99445 158 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 CHPF2Q9P2E5 772 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
HCFC1-204ENST00000461098 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
HCFC1-204ENST00000461098 TBC1D8O95759 1140 aa15.55■□□□□ 0.08
HCFC1-204ENST00000461098 RPS8P62241 208 aaKnown RBP15.55■□□□□ 0.08
HCFC1-204ENST00000461098 FKBP1BP68106 108 aa15.55■□□□□ 0.08
HCFC1-204ENST00000461098 PKN2Q16513 984 aaKnown RBP15.55■□□□□ 0.08
HCFC1-204ENST00000461098 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
HCFC1-204ENST00000461098 SCAF8Q9UPN6 1271 aaKnown RBP15.55■□□□□ 0.08
HCFC1-204ENST00000461098 CHL1O00533 1208 aa15.54■□□□□ 0.08
HCFC1-204ENST00000461098 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
HCFC1-204ENST00000461098 RSBN1LQ6PCB5 846 aaPredicted RBP15.54■□□□□ 0.08
HCFC1-204ENST00000461098 ANKRD13DQ6ZTN6 518 aa15.54■□□□□ 0.08
HCFC1-204ENST00000461098 AGBL3Q8NEM8 1001 aa15.54■□□□□ 0.08
HCFC1-204ENST00000461098 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
HCFC1-204ENST00000461098 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
HCFC1-204ENST00000461098 PITPNM2Q9BZ72 1349 aa15.53■□□□□ 0.08
HCFC1-204ENST00000461098 IRS4O14654 1257 aaPredicted RBP15.53■□□□□ 0.08
HCFC1-204ENST00000461098 TMPOP42166 694 aaKnown RBP15.53■□□□□ 0.08
HCFC1-204ENST00000461098 TM4SF4P48230 202 aa15.53■□□□□ 0.08
HCFC1-204ENST00000461098 TRIM28Q13263 835 aaKnown RBP15.53■□□□□ 0.08
HCFC1-204ENST00000461098 UBE2Q2LH0YL09 131 aa15.52■□□□□ 0.08
HCFC1-204ENST00000461098 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
HCFC1-204ENST00000461098 PRAMEF18Q5VWM3 479 aa15.52■□□□□ 0.08
HCFC1-204ENST00000461098 MYOZ2Q9NPC6 264 aa15.52■□□□□ 0.08
HCFC1-204ENST00000461098 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-204ENST00000461098 GPR25O00155 361 aa15.51■□□□□ 0.07
HCFC1-204ENST00000461098 UFL1O94874 794 aa15.51■□□□□ 0.07
HCFC1-204ENST00000461098 R3HDMLQ9H3Y0 253 aa15.51■□□□□ 0.07
HCFC1-204ENST00000461098 WTIPA6NIX2 430 aaPredicted RBP15.5■□□□□ 0.07
HCFC1-204ENST00000461098 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
HCFC1-204ENST00000461098 FBXO46Q6PJ61 603 aaPredicted RBP15.5■□□□□ 0.07
HCFC1-204ENST00000461098 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
HCFC1-204ENST00000461098 HDAC9Q9UKV0 1011 aa15.5■□□□□ 0.07
HCFC1-204ENST00000461098 NBPF9Q3BBW0 867 aa15.49■□□□□ 0.07
HCFC1-204ENST00000461098 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
HCFC1-204ENST00000461098 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-204ENST00000461098 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
HCFC1-204ENST00000461098 ANKIB1Q9P2G1 1089 aa15.49■□□□□ 0.07
HCFC1-204ENST00000461098 DBF4Q9UBU7 674 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-204ENST00000461098 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
HCFC1-204ENST00000461098 USP17L3A6NCW0 530 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 USP17L4A6NCW7 530 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 G3V3G9 751 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 HOXB7P09629 217 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 USP17L1Q7RTZ2 530 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
HCFC1-204ENST00000461098 WNT10BO00744 389 aa15.46■□□□□ 0.07
HCFC1-204ENST00000461098 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
HCFC1-204ENST00000461098 MXD3Q9BW11 206 aa15.46■□□□□ 0.07
HCFC1-204ENST00000461098 HYPKQ9NX55 129 aa15.46■□□□□ 0.07
HCFC1-204ENST00000461098 FKTNO75072 461 aa15.45■□□□□ 0.06
HCFC1-204ENST00000461098 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
HCFC1-204ENST00000461098 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
HCFC1-204ENST00000461098 DACT2Q5SW24 774 aa15.45■□□□□ 0.06
HCFC1-204ENST00000461098 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
HCFC1-204ENST00000461098 XDHP47989 1333 aa15.44■□□□□ 0.06
HCFC1-204ENST00000461098 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
HCFC1-204ENST00000461098 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-204ENST00000461098 GCC1Q96CN9 775 aa15.44■□□□□ 0.06
HCFC1-204ENST00000461098 CCDC85AQ96PX6 553 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-204ENST00000461098 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
HCFC1-204ENST00000461098 SZT2Q5T011 3432 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 PDE8AO60658 829 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 PCCAP05165 728 aaPredicted RBP15.43■□□□□ 0.06
HCFC1-204ENST00000461098 ATP2B4P23634 1241 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 SREBF2Q12772 1141 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
HCFC1-204ENST00000461098 CCDC146Q8IYE0 955 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms