RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 HDAC1Q13547 482 aaPredicted RBP12.61□□□□□ -0.39
UPF2-204ENST00000460569 TMX4Q9H1E5 349 aaPredicted RBP12.61□□□□□ -0.39
UPF2-204ENST00000460569 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
UPF2-204ENST00000460569 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
UPF2-204ENST00000460569 APBB1O00213 710 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 C21orf2O43822 256 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 CIAO1O76071 339 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 OLFM4Q6UX06 510 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
UPF2-204ENST00000460569 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
UPF2-204ENST00000460569 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
UPF2-204ENST00000460569 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 IGHDP01880 384 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
UPF2-204ENST00000460569 CHRNDQ07001 517 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 DUOX1Q9NRD9 1551 aa12.59□□□□□ -0.39
UPF2-204ENST00000460569 GPSM2P81274 684 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 CCDC93Q567U6 631 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 HELBQ8NG08 1087 aaPredicted RBP12.58□□□□□ -0.4
UPF2-204ENST00000460569 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 DCTPP1Q9H773 170 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
UPF2-204ENST00000460569 XDHP47989 1333 aa12.58□□□□□ -0.4
UPF2-204ENST00000460569 ZNF609O15014 1411 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 RAB11FIP3O75154 756 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 TAF5LO75529 589 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 KCNJ4P48050 445 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 TFCP2Q12800 502 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 B4GALNT3Q6L9W6 998 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
UPF2-204ENST00000460569 MPNDQ8N594 471 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
UPF2-204ENST00000460569 UFL1O94874 794 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 SASH1O94885 1247 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 VGLL2Q8N8G2 317 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 GGA1Q9UJY5 639 aa12.56□□□□□ -0.4
UPF2-204ENST00000460569 CCDC88AQ3V6T2 1871 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 PDE8BO95263 885 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
UPF2-204ENST00000460569 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
UPF2-204ENST00000460569 GPR162Q16538 588 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 SMC5Q8IY18 1101 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 IL1RAPL2Q9NP60 686 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
UPF2-204ENST00000460569 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
UPF2-204ENST00000460569 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 SNAP23O00161 211 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
UPF2-204ENST00000460569 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 CENPQQ7L2Z9 268 aaPredicted RBP12.54□□□□□ -0.4
UPF2-204ENST00000460569 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
UPF2-204ENST00000460569 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
UPF2-204ENST00000460569 A0A1B0GUL7 405 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 WTIPA6NIX2 430 aaPredicted RBP12.53□□□□□ -0.4
UPF2-204ENST00000460569 SLC5A1P13866 664 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
UPF2-204ENST00000460569 RASSF7Q02833 373 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
UPF2-204ENST00000460569 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 LPIN2Q92539 896 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
UPF2-204ENST00000460569 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 FPGT-TNNI3KV9GXZ4 949 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
UPF2-204ENST00000460569 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 NFKBIEO00221 500 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 IFIT1P09914 478 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms