RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
MBD1-210ENST00000457839 CCDC24Q8N4L8 307 aa19.7■□□□□ 0.74
MBD1-210ENST00000457839 KCNJ4P48050 445 aa19.7■□□□□ 0.74
MBD1-210ENST00000457839 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
MBD1-210ENST00000457839 C3orf67Q6ZVT6 689 aa19.7■□□□□ 0.74
MBD1-210ENST00000457839 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
MBD1-210ENST00000457839 RPS6KA4O75676 772 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 ADCK5Q3MIX3 580 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 TTC39AQ5SRH9 613 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
MBD1-210ENST00000457839 VGLL2Q8N8G2 317 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 KBTBD3Q8NAB2 608 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 LRRC4BQ9NT99 713 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 RBM8AQ9Y5S9 174 aaKnown RBP19.69■□□□□ 0.74
MBD1-210ENST00000457839 NHSQ6T4R5 1651 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 TAF5LO75529 589 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 CCDC158Q5M9N0 1113 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 CLEC4GQ6UXB4 293 aa19.69■□□□□ 0.74
MBD1-210ENST00000457839 COL9A3Q14050 684 aaPredicted RBP19.68■□□□□ 0.74
MBD1-210ENST00000457839 EPB41L2O43491 1005 aaKnown RBP19.68■□□□□ 0.74
MBD1-210ENST00000457839 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
MBD1-210ENST00000457839 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
MBD1-210ENST00000457839 TAF6LQ9Y6J9 622 aa19.68■□□□□ 0.74
MBD1-210ENST00000457839 MED23Q9ULK4 1368 aa19.68■□□□□ 0.74
MBD1-210ENST00000457839 PDE8BO95263 885 aa19.67■□□□□ 0.74
MBD1-210ENST00000457839 NECTIN1Q15223 517 aa19.67■□□□□ 0.74
MBD1-210ENST00000457839 RC3H1Q5TC82 1133 aaKnown RBP19.67■□□□□ 0.74
MBD1-210ENST00000457839 MAP4K1Q92918 833 aa19.67■□□□□ 0.74
MBD1-210ENST00000457839 TMX3Q96JJ7 454 aa19.67■□□□□ 0.74
MBD1-210ENST00000457839 MPHOSPH8Q99549 860 aa19.67■□□□□ 0.74
MBD1-210ENST00000457839 ZPR1O75312 459 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 GTF2E1P29083 439 aaPredicted RBP19.66■□□□□ 0.74
MBD1-210ENST00000457839 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 AK7Q96M32 723 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 NARFQ9UHQ1 456 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 TRIM37O94972 964 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
MBD1-210ENST00000457839 ZAP70P43403 619 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 FAM196AQ6ZSG2 479 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 SBF2Q86WG5 1849 aa19.66■□□□□ 0.74
MBD1-210ENST00000457839 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
MBD1-210ENST00000457839 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
MBD1-210ENST00000457839 IL17RAQ96F46 866 aa19.65■□□□□ 0.74
MBD1-210ENST00000457839 BCL11BQ9C0K0 894 aaPredicted RBP19.65■□□□□ 0.74
MBD1-210ENST00000457839 JAKMIP1Q96N16 626 aaKnown RBP19.65■□□□□ 0.74
MBD1-210ENST00000457839 COL4A1P02462 1669 aa19.65■□□□□ 0.74
MBD1-210ENST00000457839 DDX60Q8IY21 1712 aaKnown RBP19.64■□□□□ 0.74
MBD1-210ENST00000457839 KRT27Q7Z3Y8 459 aa19.64■□□□□ 0.74
MBD1-210ENST00000457839 BCORQ6W2J9 1755 aa19.64■□□□□ 0.73
MBD1-210ENST00000457839 MCAMP43121 646 aa19.64■□□□□ 0.73
MBD1-210ENST00000457839 MCMDC2Q4G0Z9 681 aa19.64■□□□□ 0.73
MBD1-210ENST00000457839 SLC27A2O14975 620 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 PHKA1P46020 1223 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 PKP1Q13835 747 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 SETDB2Q96T68 719 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 ABCC12Q96J65 1359 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 WTIPA6NIX2 430 aaPredicted RBP19.63■□□□□ 0.73
MBD1-210ENST00000457839 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
MBD1-210ENST00000457839 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
MBD1-210ENST00000457839 RFC4P35249 363 aa19.62■□□□□ 0.73
MBD1-210ENST00000457839 IGHMBP2P38935 993 aaKnown RBP19.62■□□□□ 0.73
MBD1-210ENST00000457839 AK2P54819 239 aa19.62■□□□□ 0.73
MBD1-210ENST00000457839 CCDC102BQ68D86 513 aa19.62■□□□□ 0.73
MBD1-210ENST00000457839 NBPF5PQ86XG9 351 aaPredicted RBP19.62■□□□□ 0.73
MBD1-210ENST00000457839 MROH5Q6ZUA9 1318 aa19.62■□□□□ 0.73
MBD1-210ENST00000457839 DTNBO60941 627 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 ZKSCAN1P17029 563 aaPredicted RBP19.61■□□□□ 0.73
MBD1-210ENST00000457839 SSFA2P28290 1259 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 PUM3Q15397 648 aaKnown RBP19.61■□□□□ 0.73
MBD1-210ENST00000457839 TCEANC2Q96MN5 208 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 TTC14Q96N46 770 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 TRAPPC3LQ5T215 181 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.61■□□□□ 0.73
MBD1-210ENST00000457839 TAF1P21675 1872 aa19.61■□□□□ 0.73
MBD1-210ENST00000457839 FGFR2P21802 821 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 CIZ1Q9ULV3 898 aaPredicted RBP19.6■□□□□ 0.73
MBD1-210ENST00000457839 RNF113AO15541 343 aaKnown RBP19.6■□□□□ 0.73
MBD1-210ENST00000457839 RAB3GAP1Q15042 981 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 ZMYM1Q5SVZ6 1142 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 LPIN2Q92539 896 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 KCNB2Q92953 911 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 OSBP2Q969R2 916 aa19.6■□□□□ 0.73
MBD1-210ENST00000457839 LY75O60449 1722 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 MCM2P49736 904 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 CHRNDQ07001 517 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 RUFY3Q7L099 469 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 RFX7Q2KHR2 1363 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 TAF1LQ8IZX4 1826 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 M0R2C6 588 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 CYP2E1P05181 493 aaPredicted RBP19.59■□□□□ 0.73
MBD1-210ENST00000457839 HSP90B1P14625 803 aaKnown RBP19.59■□□□□ 0.73
MBD1-210ENST00000457839 BRWD3Q6RI45 1802 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 SPEF2Q9C093 1822 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 MAST3O60307 1309 aa19.59■□□□□ 0.73
MBD1-210ENST00000457839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.58■□□□□ 0.73
MBD1-210ENST00000457839 A0A0G2JLW4 131 aa19.58■□□□□ 0.73
MBD1-210ENST00000457839 MCM4P33991 863 aa19.58■□□□□ 0.73
MBD1-210ENST00000457839 WASHC4Q2M389 1173 aa19.58■□□□□ 0.73
MBD1-210ENST00000457839 CELF1Q92879 486 aaKnown RBP19.58■□□□□ 0.73
MBD1-210ENST00000457839 GOLGB1Q14789 3259 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms