RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CDC37L1Q7L3B6 337 aa14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 EDC3Q96F86 508 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 LRP6O75581 1613 aa14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 PFKFB2O60825 505 aa14.84□□□□□ -0.03
ECHDC1-209ENST00000454591 CYP21A2P08686 494 aa14.84□□□□□ -0.03
ECHDC1-209ENST00000454591 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
ECHDC1-209ENST00000454591 RNF214Q8ND24 703 aa14.84□□□□□ -0.03
ECHDC1-209ENST00000454591 ZSCAN16Q9H4T2 348 aaPredicted RBP14.84□□□□□ -0.03
ECHDC1-209ENST00000454591 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
ECHDC1-209ENST00000454591 KDM4AO75164 1064 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 IL2RBP14784 551 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 EXOSC10Q01780 885 aaKnown RBP14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 ATL3Q6DD88 541 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 TTLL7Q6ZT98 887 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 PAG1Q9NWQ8 432 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 MYH7P12883 1935 aa14.83□□□□□ -0.04
ECHDC1-209ENST00000454591 EVCP57679 992 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 RESTQ13127 1097 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 DHX32Q7L7V1 743 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 STRCQ7RTU9 1775 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 TPM3P06753 285 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 PIP4K2AP48426 406 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 HMGN5P82970 282 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 LRRFIP1Q32MZ4 808 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 NAA16Q6N069 864 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
ECHDC1-209ENST00000454591 PLCH1Q4KWH8 1693 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 ITGB4P16144 1822 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 PCCAP05165 728 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 TCIRG1Q13488 830 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 Q6ZUG5 572 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 STOX1Q6ZVD7 989 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 DDX54Q8TDD1 881 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 JARID2Q92833 1246 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 NWD2Q9ULI1 1742 aa14.81□□□□□ -0.04
ECHDC1-209ENST00000454591 CDHR2Q9BYE9 1310 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 SALL1Q9NSC2 1324 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 A1BGP04217 495 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 CSF1RP07333 972 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 ZFYP08048 801 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 MAP3K11Q16584 847 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 DDX46Q7L014 1031 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 ZNF274Q96GC6 653 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 SEC62Q99442 399 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 NUP62CLQ9H1M0 184 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 AKAP2Q9Y2D5 859 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 MYH3P11055 1940 aa14.8□□□□□ -0.04
ECHDC1-209ENST00000454591 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 ADCY5O95622 1261 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 CAVIN2O95810 425 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 KIAA2012Q0VF49 1180 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 GIMAP6Q6P9H5 292 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 SPATA32Q96LK8 384 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 CLSTN2Q9H4D0 955 aa14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
ECHDC1-209ENST00000454591 A0A1B0GUL7 405 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 IFIT1P09914 478 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 NSUN7Q8NE18 718 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 FAM200AQ8TCP9 573 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 ARAP2Q8WZ64 1704 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 TCEANC2Q96MN5 208 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 CFAP45Q9UL16 551 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 LRP5O75197 1615 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 MAST3O60307 1309 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 WDR19Q8NEZ3 1342 aa14.78□□□□□ -0.04
ECHDC1-209ENST00000454591 AKAP11Q9UKA4 1901 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 GOLIM4O00461 696 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 PTMAP06454 111 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 LIG1P18858 919 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 SCRN1Q12765 414 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 LRRC24Q50LG9 513 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 PIBF1Q8WXW3 757 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 BRF1Q92994 677 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 ZNF512BQ96KM6 892 aaPredicted RBP14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 CEP126Q9P2H0 1117 aa14.77□□□□□ -0.04
ECHDC1-209ENST00000454591 DISP2A7MBM2 1401 aa14.77□□□□□ -0.05
ECHDC1-209ENST00000454591 ATRNO75882 1429 aa14.77□□□□□ -0.05
ECHDC1-209ENST00000454591 ADD1P35611 737 aaKnown RBP14.76□□□□□ -0.05
ECHDC1-209ENST00000454591 TIMM10P62072 90 aa14.76□□□□□ -0.05
ECHDC1-209ENST00000454591 NEUROD6Q96NK8 337 aa14.76□□□□□ -0.05
ECHDC1-209ENST00000454591 SPTLC3Q9NUV7 552 aa14.76□□□□□ -0.05
ECHDC1-209ENST00000454591 CTNNA3Q9UI47 895 aa14.76□□□□□ -0.05
ECHDC1-209ENST00000454591 RCOR1Q9UKL0 485 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms