RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GPR108Q9NPR9 543 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 TPCN1Q9ULQ1 816 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
VTA1-203ENST00000452973 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.16
VTA1-203ENST00000452973 UBN2Q6ZU65 1347 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 ANKRD18BA2A2Z9 1011 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 UBAP1LF5GYI3 381 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 CSF1RP07333 972 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
VTA1-203ENST00000452973 ITPK1Q13572 414 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 SCARF1Q14162 830 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 WASHC4Q2M389 1173 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 LRRC2Q9BYS8 371 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 SPATA31A5Q5VU36 1347 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 SPATA31A7Q8IWB4 1347 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 GJB2P29033 226 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 KCNB2Q92953 911 aa14.07□□□□□ -0.16
VTA1-203ENST00000452973 FSD2A1L4K1 749 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 PHLPP1O60346 1717 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 ATP2B3Q16720 1220 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 INTS5Q6P9B9 1019 aaKnown RBP14.06□□□□□ -0.16
VTA1-203ENST00000452973 THRAP3Q9Y2W1 955 aaKnown RBP14.06□□□□□ -0.16
VTA1-203ENST00000452973 CYP21A2P08686 494 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 SYT1P21579 422 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 FGD1P98174 961 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 SMIM5Q71RC9 77 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
VTA1-203ENST00000452973 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
VTA1-203ENST00000452973 NSFL1CQ9UNZ2 370 aaKnown RBP14.06□□□□□ -0.16
VTA1-203ENST00000452973 A0A0G2JLW4 131 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 SNAP23O00161 211 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 RPS6KB1P23443 525 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 ZAP70P43403 619 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 SUSD4Q5VX71 490 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 GPT2Q8TD30 523 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 LTBP4Q8N2S1 1624 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
VTA1-203ENST00000452973 STX6O43752 255 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 PDE8AO60658 829 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 EIF5P55010 431 aaKnown RBP14.05□□□□□ -0.16
VTA1-203ENST00000452973 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
VTA1-203ENST00000452973 ZSCAN31Q96LW9 406 aaPredicted RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 HMG20BQ9P0W2 317 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 RIPOR2Q9Y4F9 1068 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 DOT1LQ8TEK3 1739 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 ERVV-1B6SEH8 477 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 RNF113AO15541 343 aaKnown RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 HSP90B1P14625 803 aaKnown RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 NIP7Q9Y221 180 aaKnown RBP eCLIP14.04□□□□□ -0.16
VTA1-203ENST00000452973 CDHR2Q9BYE9 1310 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 RPAP1Q9BWH6 1393 aaPredicted RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 ST3GAL1Q11201 340 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 ZNF34Q8IZ26 560 aa14.04□□□□□ -0.16
VTA1-203ENST00000452973 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
VTA1-203ENST00000452973 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 PLCH1Q4KWH8 1693 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 M0R2C6 588 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 MRE11P49959 708 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 ZMYM1Q5SVZ6 1142 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 OSBP2Q969R2 916 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 SEC31BQ9NQW1 1179 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 MAST3O60307 1309 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
VTA1-203ENST00000452973 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
VTA1-203ENST00000452973 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
VTA1-203ENST00000452973 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 TTLL5Q6EMB2 1281 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 BICDL1Q6ZP65 573 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 CHST3Q7LGC8 479 aa14.03□□□□□ -0.16
VTA1-203ENST00000452973 HSPD1P10809 573 aaKnown RBP14.02□□□□□ -0.16
VTA1-203ENST00000452973 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.16
VTA1-203ENST00000452973 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 HAND2P61296 217 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 KRT32Q14532 448 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 Q6ZUG5 572 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.17
VTA1-203ENST00000452973 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 ZSCAN23Q3MJ62 389 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 STOX1Q6ZVD7 989 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 MPHOSPH8Q99549 860 aa14.02□□□□□ -0.17
VTA1-203ENST00000452973 UTP14AQ9BVJ6 771 aaKnown RBP14.02□□□□□ -0.17
VTA1-203ENST00000452973 LRP6O75581 1613 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 GADD45BO75293 160 aaPredicted RBP14.01□□□□□ -0.17
VTA1-203ENST00000452973 MCAMP43121 646 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 ANKRD1Q15327 319 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
VTA1-203ENST00000452973 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 BRF1Q92994 677 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms