RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KLK14Q9P0G3 267 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 AK5Q9Y6K8 562 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 CTTNBP2Q8WZ74 1663 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 ARHGAP31Q2M1Z3 1444 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 VPS8Q8N3P4 1428 aa4.53□□□□□ -1.68
HMGB3P8-201ENST00000449709 NINLQ9Y2I6 1382 aa4.53□□□□□ -1.69
HMGB3P8-201ENST00000449709 ERICH3Q5RHP9 1530 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 KDM5BQ9UGL1 1544 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 CCDC88BA6NC98 1476 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 GOLGA3Q08378 1498 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 SLC35F4A4IF30 521 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 ANP32CO43423 234 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 MRE11P49959 708 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 CENPCQ03188 943 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 ORC1Q13415 861 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 SUZ12Q15022 739 aaKnown RBP4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 HS1BP3Q53T59 392 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 RNFT1Q5M7Z0 435 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 DPH6Q7L8W6 267 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 EGFL6Q8IUX8 553 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 NANOS1Q8WY41 292 aaKnown RBP4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 CRELD1Q96HD1 420 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 PPP1R9BQ96SB3 815 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 GMLQ99445 158 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 PHACTR1Q9C0D0 580 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 TSPYL1Q9H0U9 437 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 DNAJC25Q9H1X3 360 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 GGNBP2Q9H3C7 697 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 ACBD3Q9H3P7 528 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 CAPN10Q9HC96 672 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 POLMQ9NP87 494 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 NLRP2Q9NX02 1062 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 PRKAG2Q9UGJ0 569 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZNF232Q9UNY5 417 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 KIAA1107Q9UPP5 1409 aa4.52□□□□□ -1.69
HMGB3P8-201ENST00000449709 NLRP1Q9C000 1473 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 BAZ1BQ9UIG0 1483 aaKnown RBP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 VGLL3A8MV65 326 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 EIF1AYO14602 144 aaKnown RBP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZNF500O60304 480 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 ITGA6P23229 1130 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 TNNT2P45379 298 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 GSK3AP49840 483 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 TREML1Q86YW5 311 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 VWA5B2Q8N398 1253 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 RNF217Q8TC41 542 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 GPR152Q8TDT2 470 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 NUDT16Q96DE0 195 aaKnown RBP4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 PLCD4Q9BRC7 762 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 EFCC1Q9HA90 598 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 POGKQ9P215 609 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 BCS1LQ9Y276 419 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 PARP3Q9Y6F1 533 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 FHAD1B1AJZ9 1412 aa4.51□□□□□ -1.69
HMGB3P8-201ENST00000449709 CLIP1P30622 1438 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 SENP3-EIF4A1A0A087X0R7 540 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 CDC14CA4D256 554 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 A6NHS1 94 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 PCSK2P16519 638 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 ATP2B1P20020 1258 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 PTGIRP43119 386 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 TNNI2P48788 182 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 RACK1P63244 317 aaKnown RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 IRX6P78412 446 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 TMED8Q6PL24 325 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 NBPF11Q86T75 865 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 WHAMMQ8TF30 809 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 C7orf43Q8WVR3 580 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 DHX38Q92620 1227 aaKnown RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 ARMC5Q96C12 935 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZSCAN10Q96SZ4 725 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 NIFKQ9BYG3 293 aaKnown RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 ANTXR1Q9H6X2 564 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 CUEDC1Q9NWM3 386 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 FAM13BQ9NYF5 915 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 DDX41Q9UJV9 622 aaKnown RBP4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 SPG7Q9UQ90 795 aa4.5□□□□□ -1.69
HMGB3P8-201ENST00000449709 OPLAHO14841 1288 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 CPNE3O75131 537 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 RPLP1P05386 114 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 EIF4BP23588 611 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 TXLNAP40222 546 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 PTPN12Q05209 780 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 GNL2Q13823 731 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 NBPF1Q3BBV0 1214 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 C8orf34Q49A92 452 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZNF385CQ66K41 422 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 FAM43BQ6ZT52 329 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 CREBRFQ8IUR6 639 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZNF654Q8IZM8 581 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 LNPKQ9C0E8 428 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 SRA1Q9HD15 236 aaKnown RBP4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZMYM4Q5VZL5 1548 aa4.49□□□□□ -1.69
HMGB3P8-201ENST00000449709 SYNJ1O43426 1573 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 AKNAQ7Z591 1439 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms