RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 MAB21L3Q8N8X9 362 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 SAAL1Q96ER3 474 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 DDX19AQ9NUU7 478 aaKnown RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 IL16Q14005 1332 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 CDKL5O76039 1030 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 AFAP1L1Q8TED9 768 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
LINC00342-202ENST00000448494 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 PLEKHA4Q9H4M7 779 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 STX6O43752 255 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
LINC00342-202ENST00000448494 FILIP1LQ4L180 1135 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 CAPN7Q9Y6W3 813 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 GNAI3P08754 354 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 TUBB4BP68371 445 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 MCM6Q14566 821 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
LINC00342-202ENST00000448494 CCDC50Q8IVM0 306 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 ADGRL2O95490 1459 aa12.37□□□□□ -0.43
LINC00342-202ENST00000448494 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
LINC00342-202ENST00000448494 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 PSME1Q06323 249 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 TRIM65Q6PJ69 517 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 RAB21Q9UL25 225 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 ZNF232Q9UNY5 417 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 CARMIL2Q6F5E8 1435 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
LINC00342-202ENST00000448494 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
LINC00342-202ENST00000448494 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
LINC00342-202ENST00000448494 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 SHPRHQ149N8 1683 aa12.36□□□□□ -0.43
LINC00342-202ENST00000448494 RTN3O95197 1032 aaPredicted RBP12.35□□□□□ -0.43
LINC00342-202ENST00000448494 CCT5P48643 541 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 IQCB1Q15051 598 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 CLSTN2Q9H4D0 955 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 RPGRIP1LQ68CZ1 1315 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 H7C1W4 665 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 SDSP20132 328 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 PLCB4Q15147 1175 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 ZRSR2Q15696 482 aaKnown RBP12.35□□□□□ -0.43
LINC00342-202ENST00000448494 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
LINC00342-202ENST00000448494 ZBTB10Q96DT7 871 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
LINC00342-202ENST00000448494 TUBBP07437 444 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 SMTNP53814 917 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 NAA25Q14CX7 972 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
LINC00342-202ENST00000448494 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 KDRP35968 1356 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 ZBTB7BO15156 539 aaPredicted RBP12.34□□□□□ -0.43
LINC00342-202ENST00000448494 SYT1P21579 422 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
LINC00342-202ENST00000448494 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
LINC00342-202ENST00000448494 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
LINC00342-202ENST00000448494 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00342-202ENST00000448494 NAP1L1P55209 391 aaKnown RBP12.33□□□□□ -0.44
LINC00342-202ENST00000448494 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
LINC00342-202ENST00000448494 SNX1Q13596 522 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 CAMK4Q16566 473 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 MYO1FO00160 1098 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 BRAPQ7Z569 592 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 MSANTD4Q8NCY6 345 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms