RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 CDHR2Q9BYE9 1310 aa31.8■■■□□ 2.68
HTATSF1-203ENST00000448450 H7C1W4 665 aa31.8■■■□□ 2.68
HTATSF1-203ENST00000448450 CELF1Q92879 486 aaKnown RBP31.8■■■□□ 2.68
HTATSF1-203ENST00000448450 CAPNS2Q96L46 248 aa31.8■■■□□ 2.68
HTATSF1-203ENST00000448450 ZNRF3Q9ULT6 936 aa31.8■■■□□ 2.68
HTATSF1-203ENST00000448450 FMR1Q06787 632 aaKnown RBP eCLIP31.79■■■□□ 2.688e-11■■□□□ 12.1
HTATSF1-203ENST00000448450 BEND3Q5T5X7 828 aa31.79■■■□□ 2.68
HTATSF1-203ENST00000448450 DPP8Q6V1X1 898 aaPredicted RBP31.79■■■□□ 2.68
HTATSF1-203ENST00000448450 RTFDC1Q9BY42 306 aaPredicted RBP31.79■■■□□ 2.68
HTATSF1-203ENST00000448450 TRAF5O00463 557 aa31.78■■■□□ 2.68
HTATSF1-203ENST00000448450 SP8Q8IXZ3 490 aa31.78■■■□□ 2.68
HTATSF1-203ENST00000448450 BEGAINQ9BUH8 593 aa31.78■■■□□ 2.68
HTATSF1-203ENST00000448450 SEC31BQ9NQW1 1179 aa31.78■■■□□ 2.68
HTATSF1-203ENST00000448450 CXCL9Q07325 125 aa31.77■■■□□ 2.68
HTATSF1-203ENST00000448450 CCDC152Q4G0S7 254 aa31.77■■■□□ 2.68
HTATSF1-203ENST00000448450 SMC4Q9NTJ3 1288 aa31.77■■■□□ 2.68
HTATSF1-203ENST00000448450 GRM1Q13255 1194 aa31.76■■■□□ 2.67
HTATSF1-203ENST00000448450 ALDH1L2Q3SY69 923 aa31.76■■■□□ 2.67
HTATSF1-203ENST00000448450 CST9Q5W186 159 aa31.75■■■□□ 2.67
HTATSF1-203ENST00000448450 CYP4F22Q6NT55 531 aa31.75■■■□□ 2.67
HTATSF1-203ENST00000448450 MPNDQ8N594 471 aa31.75■■■□□ 2.67
HTATSF1-203ENST00000448450 TLL2Q9Y6L7 1015 aa31.75■■■□□ 2.67
HTATSF1-203ENST00000448450 CT47B1P0C2W7 299 aaPredicted RBP31.74■■■□□ 2.67
HTATSF1-203ENST00000448450 GMPSP49915 693 aaPredicted RBP31.74■■■□□ 2.67
HTATSF1-203ENST00000448450 CTSWP56202 376 aa31.74■■■□□ 2.67
HTATSF1-203ENST00000448450 RPS8P62241 208 aaKnown RBP31.74■■■□□ 2.67
HTATSF1-203ENST00000448450 GPR101Q96P66 508 aaPredicted RBP31.74■■■□□ 2.67
HTATSF1-203ENST00000448450 COL4A1P02462 1669 aa31.73■■■□□ 2.67
HTATSF1-203ENST00000448450 CASP7P55210 303 aa31.73■■■□□ 2.67
HTATSF1-203ENST00000448450 KIAA2012Q0VF49 1180 aa31.73■■■□□ 2.67
HTATSF1-203ENST00000448450 CIAPIN1Q6FI81 312 aa31.73■■■□□ 2.67
HTATSF1-203ENST00000448450 TMC4Q7Z404 712 aa31.72■■■□□ 2.67
HTATSF1-203ENST00000448450 TTLL11Q8NHH1 800 aa31.72■■■□□ 2.67
HTATSF1-203ENST00000448450 SRCIN1Q9C0H9 1055 aa31.72■■■□□ 2.67
HTATSF1-203ENST00000448450 PTPRCP08575 1304 aa31.72■■■□□ 2.67
HTATSF1-203ENST00000448450 LRRC37AA6NMS7 1700 aa31.71■■■□□ 2.67
HTATSF1-203ENST00000448450 TNIP1Q15025 636 aa31.7■■■□□ 2.67
HTATSF1-203ENST00000448450 ABHD8Q96I13 439 aa31.7■■■□□ 2.67
HTATSF1-203ENST00000448450 ALDH1L1O75891 902 aa31.69■■■□□ 2.66
HTATSF1-203ENST00000448450 GREM2Q9H772 168 aa31.69■■■□□ 2.66
HTATSF1-203ENST00000448450 C9orf78Q9NZ63 289 aaPredicted RBP31.69■■■□□ 2.66
HTATSF1-203ENST00000448450 MYH3P11055 1940 aa31.69■■■□□ 2.66
HTATSF1-203ENST00000448450 RAD17O75943 681 aa31.68■■■□□ 2.66
HTATSF1-203ENST00000448450 CELF2O95319 508 aaKnown RBP31.68■■■□□ 2.66
HTATSF1-203ENST00000448450 DUOX1Q9NRD9 1551 aa31.68■■■□□ 2.66
HTATSF1-203ENST00000448450 MAP2K2P36507 400 aa31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 RARSP54136 660 aaKnown RBP31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 ZC3H15Q8WU90 426 aaKnown RBP31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 PLA2G12BQ9BX93 195 aa31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 NOB1Q9ULX3 412 aaKnown RBP31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 NSFL1CQ9UNZ2 370 aaKnown RBP31.67■■■□□ 2.66
HTATSF1-203ENST00000448450 GRM8O00222 908 aa31.66■■■□□ 2.66
HTATSF1-203ENST00000448450 SAPCD2Q86UD0 394 aa31.66■■■□□ 2.66
HTATSF1-203ENST00000448450 ANKRD18AQ8IVF6 992 aa31.66■■■□□ 2.66
HTATSF1-203ENST00000448450 GLIS2Q9BZE0 524 aaPredicted RBP31.66■■■□□ 2.66
HTATSF1-203ENST00000448450 PGAP2Q9UHJ9 254 aa31.66■■■□□ 2.66
HTATSF1-203ENST00000448450 GPSM2P81274 684 aa31.65■■■□□ 2.66
HTATSF1-203ENST00000448450 HHIPL1Q96JK4 782 aa31.64■■■□□ 2.66
HTATSF1-203ENST00000448450 CDC5LQ99459 802 aaKnown RBP31.64■■■□□ 2.66
HTATSF1-203ENST00000448450 ZBED9Q6R2W3 1325 aa31.64■■■□□ 2.66
HTATSF1-203ENST00000448450 AOC2O75106 756 aa31.63■■■□□ 2.65
HTATSF1-203ENST00000448450 FAM161AQ3B820 660 aa31.62■■■□□ 2.65
HTATSF1-203ENST00000448450 ZNF408Q9H9D4 720 aa31.62■■■□□ 2.65
HTATSF1-203ENST00000448450 C6orf229H3BNL8 230 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 CSF1RP07333 972 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 FOXO4P98177 505 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 CDC37L1Q7L3B6 337 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 TRPM4Q8TD43 1214 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 CNOT7Q9UIV1 285 aaKnown RBP31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 CHMP3Q9Y3E7 222 aa31.61■■■□□ 2.65
HTATSF1-203ENST00000448450 YDJCA8MPS7 323 aa31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 H7C1D1 291 aa31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 CA12O43570 354 aa31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 ITGA6P23229 1130 aa31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 HIRAP54198 1017 aaPredicted RBP31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 EPHA10Q5JZY3 1008 aa31.6■■■□□ 2.65
HTATSF1-203ENST00000448450 RTL9Q8NET4 1388 aa31.59■■■□□ 2.65
HTATSF1-203ENST00000448450 BRPF1P55201 1214 aaPredicted RBP31.59■■■□□ 2.65
HTATSF1-203ENST00000448450 ANKIB1Q9P2G1 1089 aa31.59■■■□□ 2.65
HTATSF1-203ENST00000448450 POLLQ9UGP5 575 aa31.59■■■□□ 2.65
HTATSF1-203ENST00000448450 RIMBP2O15034 1052 aa31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 NBPF7P0C2Y1 421 aaPredicted RBP31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 WASHC4Q2M389 1173 aa31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 LMBR1LQ6UX01 489 aa31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 MICALL2Q8IY33 904 aa31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 TSKSQ9UJT2 592 aa31.58■■■□□ 2.65
HTATSF1-203ENST00000448450 BCAR3O75815 825 aa31.57■■■□□ 2.64
HTATSF1-203ENST00000448450 SUCLG2Q96I99 432 aa31.57■■■□□ 2.64
HTATSF1-203ENST00000448450 SPEF2Q9C093 1822 aa31.56■■■□□ 2.64
HTATSF1-203ENST00000448450 IGHMBP2P38935 993 aaKnown RBP31.56■■■□□ 2.64
HTATSF1-203ENST00000448450 TBC1D16Q8TBP0 767 aa31.56■■■□□ 2.64
HTATSF1-203ENST00000448450 API5Q9BZZ5 524 aaKnown RBP31.56■■■□□ 2.64
HTATSF1-203ENST00000448450 BSDC1Q9NW68 430 aaPredicted RBP31.56■■■□□ 2.64
HTATSF1-203ENST00000448450 SHTN1A0MZ66 631 aa31.55■■■□□ 2.64
HTATSF1-203ENST00000448450 ANKRD18BA2A2Z9 1011 aa31.55■■■□□ 2.64
HTATSF1-203ENST00000448450 DPF2Q92785 391 aa31.55■■■□□ 2.64
HTATSF1-203ENST00000448450 UFL1O94874 794 aa31.54■■■□□ 2.64
HTATSF1-203ENST00000448450 DBNDD1Q9H9R9 158 aa31.54■■■□□ 2.64
HTATSF1-203ENST00000448450 PODXL2Q9NZ53 605 aa31.54■■■□□ 2.64
HTATSF1-203ENST00000448450 ZBTB12Q9Y330 459 aaPredicted RBP31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms