RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 USP16Q9Y5T5 823 aa15.22■□□□□ 0.03
PPFIA4-204ENST00000447715 TMEM67Q5HYA8 995 aa15.22■□□□□ 0.03
PPFIA4-204ENST00000447715 KIF1BPQ96EK5 621 aa15.22■□□□□ 0.03
PPFIA4-204ENST00000447715 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
PPFIA4-204ENST00000447715 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 MICU3Q86XE3 530 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 TNPO1Q92973 898 aaKnown RBP15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 HGSO14964 777 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 PPFIBP2Q8ND30 876 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 CASQ2O14958 399 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 GBP6Q6ZN66 633 aa15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 DACT3Q96B18 629 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-204ENST00000447715 GLRX3O76003 335 aaKnown RBP15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 HSPA1LP34931 641 aa15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 KIF5AQ12840 1032 aa15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 SETDB1Q15047 1291 aa15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 SARNPP82979 210 aaKnown RBP15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 SKAP1Q86WV1 359 aa15.21■□□□□ 0.02
PPFIA4-204ENST00000447715 HAUS7Q99871 368 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 KAT14Q9H8E8 782 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 PPP1R21Q6ZMI0 780 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 TTC12Q9H892 705 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 EBAG9O00559 213 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 IARSP41252 1262 aaKnown RBP15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
PPFIA4-204ENST00000447715 ANKRD30BQ9BXX2 1392 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 TSPY2A6NKD2 308 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 FAM135AQ9P2D6 1515 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 STARD3NLO95772 234 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 SLC5A1P13866 664 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 PCK1P35558 622 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.029e-7■■■□□ 17.4
PPFIA4-204ENST00000447715 TACC1O75410 805 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 LACTBP83111 547 aaPredicted RBP15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 PPP2R5CQ13362 524 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 PPP1R7Q15435 360 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 VPS52Q8N1B4 723 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 HMGB1P09429 215 aaKnown RBP15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 UBLCP1Q8WVY7 318 aaPredicted RBP15.19■□□□□ 0.02
PPFIA4-204ENST00000447715 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 RNF41Q9H4P4 317 aaPredicted RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 GOLIM4O00461 696 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 KARSQ15046 597 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 RPGRQ92834 1020 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 DDX27Q96GQ7 796 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 STAT6P42226 847 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 FCHSD2O94868 740 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 VIMP08670 466 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 TCHPQ9BT92 498 aa15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
PPFIA4-204ENST00000447715 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 CTAGE9A4FU28 777 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 FAM13AO94988 1023 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 METAP2P50579 478 aaKnown RBP eCLIP15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 NEDD9Q14511 834 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 PLS1Q14651 629 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 SKILP12757 684 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
PPFIA4-204ENST00000447715 TAF12Q16514 161 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 SF3A3Q12874 501 aaKnown RBP eCLIP15.16■□□□□ 0.023e-8■■■■■ 54.4
PPFIA4-204ENST00000447715 GKAP1Q5VSY0 366 aaPredicted RBP15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 FMNL3Q8IVF7 1028 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 NUF2Q9BZD4 464 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 ALDH3A1P30838 453 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 TXNDC9O14530 226 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 SYKP43405 635 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 ATP11AP98196 1134 aa15.16■□□□□ 0.02
PPFIA4-204ENST00000447715 ANO6Q4KMQ2 910 aa15.15■□□□□ 0.02
PPFIA4-204ENST00000447715 RABEP2Q9H5N1 569 aa15.15■□□□□ 0.02
PPFIA4-204ENST00000447715 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
PPFIA4-204ENST00000447715 GOLGA1Q92805 767 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms