RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 FOXO3O43524 673 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 PTCD1O75127 700 aaKnown RBP2.62□□□□□ -1.99
SNHG3-203ENST00000447507 LGR5O75473 907 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 SASH3O75995 380 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 MICAL2O94851 1124 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 GLB1P16278 677 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 SSTR4P31391 388 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 USP17L24Q0WX57 530 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 PTK7Q13308 1070 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 CRTC2Q53ET0 693 aaPredicted RBP2.62□□□□□ -1.99
SNHG3-203ENST00000447507 Q6ZS46 218 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 HFE2Q6ZVN8 426 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 MAP4K3Q8IVH8 894 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 GLMNQ92990 594 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 PLD4Q96BZ4 506 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 MYO19Q96H55 970 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 RBSNQ9H1K0 784 aa2.62□□□□□ -1.99
SNHG3-203ENST00000447507 TLR7Q9NYK1 1049 aaKnown RBP2.62□□□□□ -1.99
SNHG3-203ENST00000447507 TFIP11Q9UBB9 837 aaKnown RBP2.62□□□□□ -1.99
SNHG3-203ENST00000447507 XYLBO75191 536 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 ALX3O95076 343 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 EGFRP00533 1210 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 GHRHP01286 108 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 PSAPP07602 524 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 HOXD8P13378 290 aaPredicted RBP2.61□□□□□ -1.99
SNHG3-203ENST00000447507 SOX18P35713 384 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 C11orf91Q3C1V1 193 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 GDF6Q6KF10 455 aaPredicted RBP2.61□□□□□ -1.99
SNHG3-203ENST00000447507 ANKMY2Q8IV38 441 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 TMEM130Q8N3G9 435 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 IL22RA1Q8N6P7 574 aa2.61□□□□□ -1.99
SNHG3-203ENST00000447507 NSUN5Q96P11 429 aaKnown RBP2.61□□□□□ -1.99
SNHG3-203ENST00000447507 RTCBQ9Y3I0 505 aaKnown RBP2.61□□□□□ -1.99
SNHG3-203ENST00000447507 LOC102724428A0A0B4J2F2 783 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 J3QW42 95 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 DHX15O43143 795 aaKnown RBP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 IGLV1-40P01703 118 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 IGHA2P01877 340 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 WEE1P30291 646 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 SIK1P57059 783 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 SETDB1Q15047 1291 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 KANK4Q5T7N3 995 aaPredicted RBP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 PROSER2Q86WR7 435 aaPredicted RBP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 TREML1Q86YW5 311 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 RGL4Q8IZJ4 473 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 CMTR1Q8N1G2 835 aaKnown RBP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 CACTIN-AS1Q8N1I8 211 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 AGGF1Q8N302 714 aaeCLIP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 PPP1R12CQ9BZL4 782 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 MUC3BQ9H195 1237 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.6□□□□□ -1.99
SNHG3-203ENST00000447507 RAPGEFL1Q9UHV5 662 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 USP20Q9Y2K6 914 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 RAXQ9Y2V3 346 aa2.6□□□□□ -1.99
SNHG3-203ENST00000447507 OPLAHO14841 1288 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 MMP20O60882 483 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 TGFB1P01137 390 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 GRIK1P39086 918 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 UVSSAQ2YD98 709 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 ACAD11Q709F0 780 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 ARXQ96QS3 562 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 CEP41Q9BYV8 373 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 VRTNQ9H8Y1 702 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 STOML1Q9UBI4 398 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 ADGRE2Q9UHX3 823 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 TRIM33Q9UPN9 1127 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 PPME1Q9Y570 386 aa2.59□□□□□ -1.99
SNHG3-203ENST00000447507 WISP1O95388 367 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 LMOD1P29536 600 aaPredicted RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 NFIAQ12857 509 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 INTS5Q6P9B9 1019 aaKnown RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 NLRP13Q86W25 1043 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 ZDHHC13Q8IUH4 622 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 ARMC10Q8N2F6 343 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 FNBP4Q8N3X1 1017 aaPredicted RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 UTP4Q969X6 686 aaKnown RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 CALR3Q96L12 384 aaKnown RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 UBL7Q96S82 380 aaPredicted RBP2.58□□□□□ -2
SNHG3-203ENST00000447507 LRFN2Q9ULH4 789 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 KCNMB2Q9Y691 235 aa2.58□□□□□ -2
SNHG3-203ENST00000447507 LINC01387J3KSC0 135 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 SMNDC1O75940 238 aaKnown RBP eCLIP2.57□□□□□ -2
SNHG3-203ENST00000447507 MED26O95402 600 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 SPINK2P20155 84 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 CD68P34810 354 aaPredicted RBP2.57□□□□□ -2
SNHG3-203ENST00000447507 ATP11AP98196 1134 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 HYAL2Q12891 473 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 FKBP5Q13451 457 aaPredicted RBP2.57□□□□□ -2
SNHG3-203ENST00000447507 TRIP4Q15650 581 aaPredicted RBP2.57□□□□□ -2
SNHG3-203ENST00000447507 COX20Q5RI15 118 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 CEP135Q66GS9 1140 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 FAM117BQ6P1L5 589 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 TXNDC11Q6PKC3 985 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 DBX2Q6ZNG2 339 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 GALNT11Q8NCW6 608 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 OR13H1Q8NG92 308 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 FAM200AQ8TCP9 573 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 CLUAP1Q96AJ1 413 aa2.57□□□□□ -2
SNHG3-203ENST00000447507 ASIC4Q96FT7 647 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms