RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 BICC1Q9H694 974 aaKnown RBP18.71■□□□□ 0.59
HDAC4-204ENST00000446876 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-204ENST00000446876 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
HDAC4-204ENST00000446876 MINPP1Q9UNW1 487 aa18.71■□□□□ 0.59
HDAC4-204ENST00000446876 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
HDAC4-204ENST00000446876 SCN4AP35499 1836 aa18.71■□□□□ 0.59
HDAC4-204ENST00000446876 VEGFAP15692 232 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-204ENST00000446876 CCT4P50991 539 aaKnown RBP18.7■□□□□ 0.58
HDAC4-204ENST00000446876 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
HDAC4-204ENST00000446876 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
HDAC4-204ENST00000446876 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-204ENST00000446876 ZNF594Q96JF6 807 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-204ENST00000446876 VPS33BQ9H267 617 aa18.7■□□□□ 0.58
HDAC4-204ENST00000446876 GGA1Q9UJY5 639 aa18.7■□□□□ 0.58
HDAC4-204ENST00000446876 XDHP47989 1333 aa18.7■□□□□ 0.58
HDAC4-204ENST00000446876 YDJCA8MPS7 323 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 TRIM27P14373 513 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 DBNDD1Q9H9R9 158 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 SCN9AQ15858 1988 aa18.69■□□□□ 0.58
HDAC4-204ENST00000446876 TOMM70O94826 608 aa18.68■□□□□ 0.58
HDAC4-204ENST00000446876 DOK7Q18PE1 504 aa18.68■□□□□ 0.58
HDAC4-204ENST00000446876 GPC2Q8N158 579 aa18.68■□□□□ 0.58
HDAC4-204ENST00000446876 ARHGAP45Q92619 1136 aa18.68■□□□□ 0.58
HDAC4-204ENST00000446876 L3MBTL3Q96JM7 780 aaPredicted RBP18.68■□□□□ 0.58
HDAC4-204ENST00000446876 EYA3Q99504 573 aa18.68■□□□□ 0.58
HDAC4-204ENST00000446876 RAD17O75943 681 aa18.67■□□□□ 0.58
HDAC4-204ENST00000446876 CXCL9Q07325 125 aa18.67■□□□□ 0.58
HDAC4-204ENST00000446876 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
HDAC4-204ENST00000446876 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
HDAC4-204ENST00000446876 ECE2O60344 883 aa18.66■□□□□ 0.58
HDAC4-204ENST00000446876 ATP2B4P23634 1241 aa18.66■□□□□ 0.58
HDAC4-204ENST00000446876 CHRNDQ07001 517 aa18.66■□□□□ 0.58
HDAC4-204ENST00000446876 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-204ENST00000446876 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
HDAC4-204ENST00000446876 ATF7IPQ6VMQ6 1270 aa18.66■□□□□ 0.58
HDAC4-204ENST00000446876 IPO8O15397 1037 aaKnown RBP18.65■□□□□ 0.58
HDAC4-204ENST00000446876 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
HDAC4-204ENST00000446876 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
HDAC4-204ENST00000446876 HELBQ8NG08 1087 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-204ENST00000446876 RBM46Q8TBY0 533 aaKnown RBP18.65■□□□□ 0.58
HDAC4-204ENST00000446876 MEIS3Q99687 375 aa18.65■□□□□ 0.58
HDAC4-204ENST00000446876 ZC3H12CQ9C0D7 883 aaKnown RBP18.65■□□□□ 0.58
HDAC4-204ENST00000446876 KCNQ5Q9NR82 932 aa18.65■□□□□ 0.58
HDAC4-204ENST00000446876 SNAP23O00161 211 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 TAF5LO75529 589 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 UBTFL1P0CB47 393 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-204ENST00000446876 KLRK1P26718 216 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 SCNN1DP51172 638 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 ZKSCAN2Q63HK3 967 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
HDAC4-204ENST00000446876 CIAPIN1Q6FI81 312 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 PUS3Q9BZE2 481 aaKnown RBP18.64■□□□□ 0.57
HDAC4-204ENST00000446876 TAF1DQ9H5J8 278 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-204ENST00000446876 HACL1Q9UJ83 578 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 PSME4Q14997 1843 aa18.64■□□□□ 0.57
HDAC4-204ENST00000446876 IQCA1LA6NCM1 817 aa18.63■□□□□ 0.57
HDAC4-204ENST00000446876 KLHDC4Q8TBB5 520 aa18.63■□□□□ 0.57
HDAC4-204ENST00000446876 ANKRD2Q9GZV1 360 aa18.63■□□□□ 0.57
HDAC4-204ENST00000446876 CNNM1Q9NRU3 951 aa18.63■□□□□ 0.57
HDAC4-204ENST00000446876 EPHX2P34913 555 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-204ENST00000446876 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 TXNRD3Q86VQ6 643 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 LRRFIP2Q9Y608 721 aaKnown RBP18.62■□□□□ 0.57
HDAC4-204ENST00000446876 ZNF804BA4D1E1 1349 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 MED23Q9ULK4 1368 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 ADAMTSL1Q8N6G6 1762 aa18.62■□□□□ 0.57
HDAC4-204ENST00000446876 ZNF646O15015 1829 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-204ENST00000446876 G3V3G9 751 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 PSMD14O00487 310 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 PLIN1O60240 522 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 EPS15P42566 896 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-204ENST00000446876 DCAF8Q5TAQ9 597 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
HDAC4-204ENST00000446876 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
HDAC4-204ENST00000446876 LMOD1P29536 600 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-204ENST00000446876 KCNJ4P48050 445 aa18.6■□□□□ 0.57
HDAC4-204ENST00000446876 TNIP1Q15025 636 aa18.6■□□□□ 0.57
HDAC4-204ENST00000446876 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
HDAC4-204ENST00000446876 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
HDAC4-204ENST00000446876 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-204ENST00000446876 RLBP1P12271 317 aa18.59■□□□□ 0.57
HDAC4-204ENST00000446876 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
HDAC4-204ENST00000446876 GPRC5DQ9NZD1 345 aa18.59■□□□□ 0.57
HDAC4-204ENST00000446876 IRS2Q9Y4H2 1338 aa18.58■□□□□ 0.57
HDAC4-204ENST00000446876 RFX5P48382 616 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-204ENST00000446876 FSTL1Q12841 308 aa18.58■□□□□ 0.56
HDAC4-204ENST00000446876 HSPA6P17066 643 aa18.57■□□□□ 0.56
HDAC4-204ENST00000446876 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
HDAC4-204ENST00000446876 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
HDAC4-204ENST00000446876 GNAI3P08754 354 aa18.56■□□□□ 0.56
HDAC4-204ENST00000446876 CHADLQ6NUI6 762 aa18.56■□□□□ 0.56
HDAC4-204ENST00000446876 LDHDQ86WU2 507 aa18.56■□□□□ 0.56
HDAC4-204ENST00000446876 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
HDAC4-204ENST00000446876 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms