RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GOLGA8DPQ0D2H9 430 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
VPS52-212ENST00000445902 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 CARD6Q9BX69 1037 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 CTAGE5O15320 804 aa16.28■□□□□ 0.2
VPS52-212ENST00000445902 ZRANB2O95218 330 aaKnown RBP eCLIP16.28■□□□□ 0.2
VPS52-212ENST00000445902 ADD1P35611 737 aaKnown RBP16.28■□□□□ 0.2
VPS52-212ENST00000445902 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
VPS52-212ENST00000445902 A0A1B0GVL5 298 aa16.28■□□□□ 0.2
VPS52-212ENST00000445902 OAS2P29728 719 aaKnown RBP16.28■□□□□ 0.2
VPS52-212ENST00000445902 EAF2Q96CJ1 260 aaPredicted RBP16.28■□□□□ 0.2
VPS52-212ENST00000445902 OSBPL5Q9H0X9 879 aaPredicted RBP16.28■□□□□ 0.2
VPS52-212ENST00000445902 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.2
VPS52-212ENST00000445902 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.2
VPS52-212ENST00000445902 TRIM66O15016 1216 aa16.27■□□□□ 0.2
VPS52-212ENST00000445902 FANCGO15287 622 aa16.27■□□□□ 0.2
VPS52-212ENST00000445902 SASH3O75995 380 aa16.27■□□□□ 0.2
VPS52-212ENST00000445902 TNNT3P45378 269 aaPredicted RBP16.27■□□□□ 0.2
VPS52-212ENST00000445902 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.2
VPS52-212ENST00000445902 SCRN1Q12765 414 aa16.27■□□□□ 0.19
VPS52-212ENST00000445902 C10orf67Q8IYJ2 551 aa16.27■□□□□ 0.19
VPS52-212ENST00000445902 LCMT1Q9UIC8 334 aa16.27■□□□□ 0.19
VPS52-212ENST00000445902 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 TPM4P67936 248 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 MYH15Q9Y2K3 1946 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 FAM193AP78312 1265 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
VPS52-212ENST00000445902 ENGASEQ8NFI3 743 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 RSPH14Q9UHP6 348 aa16.26■□□□□ 0.19
VPS52-212ENST00000445902 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 ETF1P62495 437 aaKnown RBP16.25■□□□□ 0.19
VPS52-212ENST00000445902 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 NEK1Q96PY6 1258 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 KCND1Q9NSA2 647 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 KCNQ3O43525 872 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 EVCP57679 992 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
VPS52-212ENST00000445902 NCOA5Q9HCD5 579 aaKnown RBP16.25■□□□□ 0.19
VPS52-212ENST00000445902 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
VPS52-212ENST00000445902 SASH1O94885 1247 aa16.24■□□□□ 0.19
VPS52-212ENST00000445902 TXLNBQ8N3L3 684 aa16.24■□□□□ 0.19
VPS52-212ENST00000445902 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
VPS52-212ENST00000445902 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
VPS52-212ENST00000445902 TADA3O75528 432 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 ZSCAN26Q16670 478 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 HIP1O00291 1037 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 NDUFA8P51970 172 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
VPS52-212ENST00000445902 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 KDRP35968 1356 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 PTPDC1A2A3K4 754 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 TAF5LO75529 589 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 APOBRQ0VD83 1088 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 SMC1AQ14683 1233 aaKnown RBP16.23■□□□□ 0.19
VPS52-212ENST00000445902 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
VPS52-212ENST00000445902 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
VPS52-212ENST00000445902 FLT4P35916 1363 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 COL15A1P39059 1388 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 NRDCO43847 1150 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 LMAN1P49257 510 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 TRIM65Q6PJ69 517 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
VPS52-212ENST00000445902 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
VPS52-212ENST00000445902 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
VPS52-212ENST00000445902 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
VPS52-212ENST00000445902 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
VPS52-212ENST00000445902 RASSF4Q9H2L5 321 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 CTDNEP1O95476 244 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 MLECQ14165 292 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
VPS52-212ENST00000445902 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 FMR1NBQ8N0W7 255 aaPredicted RBP16.21■□□□□ 0.19
VPS52-212ENST00000445902 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
VPS52-212ENST00000445902 LRRC37A3O60309 1634 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 MYO1CO00159 1063 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms