RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 LIMCH1Q9UPQ0 1083 aa23.29■■□□□ 1.32
LINC00963-205ENST00000444184 CICQ96RK0 1608 aaPredicted RBP23.28■■□□□ 1.32
LINC00963-205ENST00000444184 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 VPS53Q5VIR6 699 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 RIPOR2Q9Y4F9 1068 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 CAMTA2O94983 1202 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 PSMA5P28066 241 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 TTC39AQ5SRH9 613 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 AK7Q96M32 723 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 CNNM1Q9NRU3 951 aa23.28■■□□□ 1.32
LINC00963-205ENST00000444184 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
LINC00963-205ENST00000444184 RUFY3Q7L099 469 aa23.27■■□□□ 1.32
LINC00963-205ENST00000444184 ADORA1P30542 326 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 SKOR2Q2VWA4 1001 aaPredicted RBP23.26■■□□□ 1.31
LINC00963-205ENST00000444184 UTP14AQ9BVJ6 771 aaKnown RBP23.26■■□□□ 1.31
LINC00963-205ENST00000444184 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 ZDHHC9Q9Y397 364 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 SH3TC1Q8TE82 1336 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
LINC00963-205ENST00000444184 CHGBP05060 677 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 SEC62Q99442 399 aaKnown RBP23.26■■□□□ 1.31
LINC00963-205ENST00000444184 HELLSQ9NRZ9 838 aa23.26■■□□□ 1.31
LINC00963-205ENST00000444184 TRPC5Q9UL62 973 aaPredicted RBP23.26■■□□□ 1.31
LINC00963-205ENST00000444184 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
LINC00963-205ENST00000444184 USPL1Q5W0Q7 1092 aa23.25■■□□□ 1.31
LINC00963-205ENST00000444184 FAM177BA6PVY3 158 aa23.24■■□□□ 1.31
LINC00963-205ENST00000444184 CCDC129Q6ZRS4 1044 aa23.24■■□□□ 1.31
LINC00963-205ENST00000444184 FKBP4Q02790 459 aaKnown RBP eCLIP23.24■■□□□ 1.31
LINC00963-205ENST00000444184 TSGA10IPQ3SY00 556 aa23.24■■□□□ 1.31
LINC00963-205ENST00000444184 LARP6Q9BRS8 491 aaKnown RBP23.24■■□□□ 1.31
LINC00963-205ENST00000444184 GZF1Q9H116 711 aaPredicted RBP23.24■■□□□ 1.31
LINC00963-205ENST00000444184 U3KPZ7 1027 aaPredicted RBP23.24■■□□□ 1.31
LINC00963-205ENST00000444184 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
LINC00963-205ENST00000444184 HCLS1P14317 486 aaPredicted RBP23.23■■□□□ 1.31
LINC00963-205ENST00000444184 ZSCAN31Q96LW9 406 aaPredicted RBP23.23■■□□□ 1.31
LINC00963-205ENST00000444184 NIP7Q9Y221 180 aaKnown RBP eCLIP23.23■■□□□ 1.31
LINC00963-205ENST00000444184 RPAP1Q9BWH6 1393 aaPredicted RBP23.22■■□□□ 1.31
LINC00963-205ENST00000444184 RNF113AO15541 343 aaKnown RBP23.22■■□□□ 1.31
LINC00963-205ENST00000444184 ZMYM1Q5SVZ6 1142 aa23.22■■□□□ 1.31
LINC00963-205ENST00000444184 RREB1Q92766 1687 aa23.22■■□□□ 1.31
LINC00963-205ENST00000444184 LRRFIP1Q32MZ4 808 aaKnown RBP23.22■■□□□ 1.31
LINC00963-205ENST00000444184 MCTP1Q6DN14 999 aa23.22■■□□□ 1.31
LINC00963-205ENST00000444184 BLOC1S2Q6QNY1 142 aa23.22■■□□□ 1.31
LINC00963-205ENST00000444184 ZNF652Q9Y2D9 606 aa23.22■■□□□ 1.31
LINC00963-205ENST00000444184 ZNF831Q5JPB2 1677 aa23.21■■□□□ 1.31
LINC00963-205ENST00000444184 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
LINC00963-205ENST00000444184 MYH3P11055 1940 aa23.21■■□□□ 1.31
LINC00963-205ENST00000444184 BRD1O95696 1058 aa23.21■■□□□ 1.31
LINC00963-205ENST00000444184 HSP90B1P14625 803 aaKnown RBP23.21■■□□□ 1.31
LINC00963-205ENST00000444184 KRT32Q14532 448 aa23.21■■□□□ 1.31
LINC00963-205ENST00000444184 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.21■■□□□ 1.31
LINC00963-205ENST00000444184 NHSQ6T4R5 1651 aa23.2■■□□□ 1.31
LINC00963-205ENST00000444184 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
LINC00963-205ENST00000444184 SH2B1Q9NRF2 756 aaPredicted RBP23.2■■□□□ 1.3
LINC00963-205ENST00000444184 PDE8BO95263 885 aa23.19■■□□□ 1.3
LINC00963-205ENST00000444184 VGLL2Q8N8G2 317 aa23.19■■□□□ 1.3
LINC00963-205ENST00000444184 TAF6LQ9Y6J9 622 aa23.19■■□□□ 1.3
LINC00963-205ENST00000444184 RPS6KB1P23443 525 aa23.19■■□□□ 1.3
LINC00963-205ENST00000444184 SLFNL1Q499Z3 407 aa23.19■■□□□ 1.3
LINC00963-205ENST00000444184 FOXD4L5Q5VV16 416 aaPredicted RBP23.19■■□□□ 1.3
LINC00963-205ENST00000444184 FOXD4L4Q8WXT5 416 aaPredicted RBP23.19■■□□□ 1.3
LINC00963-205ENST00000444184 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
LINC00963-205ENST00000444184 QTRT2Q9H974 415 aaKnown RBP23.18■■□□□ 1.3
LINC00963-205ENST00000444184 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
LINC00963-205ENST00000444184 MROH5Q6ZUA9 1318 aa23.18■■□□□ 1.3
LINC00963-205ENST00000444184 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
LINC00963-205ENST00000444184 NTSR2O95665 410 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 SCARF1Q14162 830 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 ANKRD1Q15327 319 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 PTF1AQ7RTS3 328 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 ALDH8A1Q9H2A2 487 aaPredicted RBP23.17■■□□□ 1.3
LINC00963-205ENST00000444184 BTAF1O14981 1849 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 LARGE1O95461 756 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 ZAP70P43403 619 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 CCDC152Q4G0S7 254 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 DSCC1Q9BVC3 393 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 SMC3Q9UQE7 1217 aa23.17■■□□□ 1.3
LINC00963-205ENST00000444184 ZFYP08048 801 aaPredicted RBP23.16■■□□□ 1.3
LINC00963-205ENST00000444184 KCNQ4P56696 695 aa23.16■■□□□ 1.3
LINC00963-205ENST00000444184 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
LINC00963-205ENST00000444184 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
LINC00963-205ENST00000444184 ZNF512BQ96KM6 892 aaPredicted RBP23.16■■□□□ 1.3
LINC00963-205ENST00000444184 MPHOSPH8Q99549 860 aa23.16■■□□□ 1.3
LINC00963-205ENST00000444184 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
LINC00963-205ENST00000444184 CYP21A2P08686 494 aa23.15■■□□□ 1.3
LINC00963-205ENST00000444184 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
LINC00963-205ENST00000444184 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
LINC00963-205ENST00000444184 MAST3O60307 1309 aa23.15■■□□□ 1.3
LINC00963-205ENST00000444184 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
LINC00963-205ENST00000444184 PUM3Q15397 648 aaKnown RBP23.15■■□□□ 1.3
LINC00963-205ENST00000444184 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
LINC00963-205ENST00000444184 COL9A3Q14050 684 aaPredicted RBP23.14■■□□□ 1.29
LINC00963-205ENST00000444184 ME3Q16798 604 aa23.14■■□□□ 1.29
LINC00963-205ENST00000444184 LPIN2Q92539 896 aa23.14■■□□□ 1.29
LINC00963-205ENST00000444184 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
LINC00963-205ENST00000444184 LMBRD1Q9NUN5 540 aa23.14■■□□□ 1.29
LINC00963-205ENST00000444184 TPCN1Q9ULQ1 816 aa23.14■■□□□ 1.29
LINC00963-205ENST00000444184 DDX49Q9Y6V7 483 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms