RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 SNX14Q9Y5W7 946 aa10.37□□□□□ -0.75
RER1-205ENST00000443438 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
RER1-205ENST00000443438 SBF2Q86WG5 1849 aa10.37□□□□□ -0.75
RER1-205ENST00000443438 CCDC171Q6TFL3 1326 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 DDX60Q8IY21 1712 aaKnown RBP10.36□□□□□ -0.75
RER1-205ENST00000443438 CHGBP05060 677 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 FGFR2P21802 821 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 NECTIN1Q15223 517 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 TAF7LQ5H9L4 462 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 LDHAL6AQ6ZMR3 332 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 KBTBD3Q8NAB2 608 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 ZNF652Q9Y2D9 606 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
RER1-205ENST00000443438 LAMB2P55268 1798 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 FAM177BA6PVY3 158 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 ST18O60284 1047 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 TAF5LO75529 589 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 ATXN8OSP0DMR3 200 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 NEK4P51957 841 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 ATP2B3Q16720 1220 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 ERFEQ4G0M1 354 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 METTL24Q5JXM2 366 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 USPL1Q5W0Q7 1092 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 TBC1D9BQ66K14 1250 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 KIAA1211Q6ZU35 1233 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 ZNF589Q86UQ0 364 aaPredicted RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 SEC31BQ9NQW1 1179 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 PAG1Q9NWQ8 432 aa10.35□□□□□ -0.75
RER1-205ENST00000443438 SRP68Q9UHB9 627 aaKnown RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
RER1-205ENST00000443438 COL4A1P02462 1669 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 GOLIM4O00461 696 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 GNPATO15228 680 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 PDE8BO95263 885 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 IFIT1P09914 478 aaKnown RBP10.34□□□□□ -0.75
RER1-205ENST00000443438 SCARF1Q14162 830 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
RER1-205ENST00000443438 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
RER1-205ENST00000443438 TTC14Q96N46 770 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 RBM8AQ9Y5S9 174 aaKnown RBP10.34□□□□□ -0.75
RER1-205ENST00000443438 MYH3P11055 1940 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 ABCC12Q96J65 1359 aa10.34□□□□□ -0.75
RER1-205ENST00000443438 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 HSP90B1P14625 803 aaKnown RBP10.33□□□□□ -0.76
RER1-205ENST00000443438 MCM2P49736 904 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 CUL4AQ13619 759 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 SLFNL1Q499Z3 407 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 CCDC152Q4G0S7 254 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 ZMYM1Q5SVZ6 1142 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
RER1-205ENST00000443438 SEC62Q99442 399 aaKnown RBP10.33□□□□□ -0.76
RER1-205ENST00000443438 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 HELLSQ9NRZ9 838 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 SPEF2Q9C093 1822 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 C4BP0C0L5 1744 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 COL24A1Q17RW2 1714 aa10.33□□□□□ -0.76
RER1-205ENST00000443438 SLC27A2O14975 620 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 RNF113AO15541 343 aaKnown RBP10.32□□□□□ -0.76
RER1-205ENST00000443438 SSFA2P28290 1259 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 RAB3GAP1Q15042 981 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 TSGA10IPQ3SY00 556 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 MCMDC2Q4G0Z9 681 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 TTC39AQ5SRH9 613 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 FAM196AQ6ZSG2 479 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 KRT27Q7Z3Y8 459 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
RER1-205ENST00000443438 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
RER1-205ENST00000443438 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
RER1-205ENST00000443438 RPAP1Q9BWH6 1393 aaPredicted RBP10.31□□□□□ -0.76
RER1-205ENST00000443438 CYP2E1P05181 493 aaPredicted RBP10.31□□□□□ -0.76
RER1-205ENST00000443438 RXRBP28702 533 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 ARID4AP29374 1257 aaPredicted RBP10.31□□□□□ -0.76
RER1-205ENST00000443438 ZAP70P43403 619 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 PUM3Q15397 648 aaKnown RBP10.31□□□□□ -0.76
RER1-205ENST00000443438 ADCK5Q3MIX3 580 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 HELBQ8NG08 1087 aaPredicted RBP10.31□□□□□ -0.76
RER1-205ENST00000443438 LPIN2Q92539 896 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
RER1-205ENST00000443438 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
RER1-205ENST00000443438 ZPR1O75312 459 aa10.3□□□□□ -0.76
RER1-205ENST00000443438 MCAMP43121 646 aa10.3□□□□□ -0.76
RER1-205ENST00000443438 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
RER1-205ENST00000443438 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
RER1-205ENST00000443438 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms