RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SLC4A10Q6U841 1118 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 BCL2L13Q9BXK5 485 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 BSDC1Q9NW68 430 aaPredicted RBP28.08■■■□□ 2.09
HDLBP-220ENST00000442730 GGA1Q9UJY5 639 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 PTPRCP08575 1304 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 XDHP47989 1333 aa28.08■■■□□ 2.09
HDLBP-220ENST00000442730 RAD17O75943 681 aa28.07■■■□□ 2.08
HDLBP-220ENST00000442730 CIAPIN1Q6FI81 312 aa28.07■■■□□ 2.08
HDLBP-220ENST00000442730 PNMA8AQ86V59 439 aaPredicted RBP28.07■■■□□ 2.08
HDLBP-220ENST00000442730 SRCIN1Q9C0H9 1055 aa28.07■■■□□ 2.08
HDLBP-220ENST00000442730 DBNDD1Q9H9R9 158 aa28.07■■■□□ 2.08
HDLBP-220ENST00000442730 ITGA6P23229 1130 aa28.06■■■□□ 2.08
HDLBP-220ENST00000442730 EPS15P42566 896 aa28.06■■■□□ 2.08
HDLBP-220ENST00000442730 HTRA3P83110 453 aa28.06■■■□□ 2.08
HDLBP-220ENST00000442730 FOXO4P98177 505 aa28.06■■■□□ 2.08
HDLBP-220ENST00000442730 ALDH1L2Q3SY69 923 aa28.06■■■□□ 2.08
HDLBP-220ENST00000442730 GMPSP49915 693 aaPredicted RBP28.05■■■□□ 2.08
HDLBP-220ENST00000442730 GPRC5DQ9NZD1 345 aa28.05■■■□□ 2.08
HDLBP-220ENST00000442730 MINPP1Q9UNW1 487 aa28.05■■■□□ 2.08
HDLBP-220ENST00000442730 ECE2O60344 883 aa28.04■■■□□ 2.08
HDLBP-220ENST00000442730 CT47B1P0C2W7 299 aaPredicted RBP28.04■■■□□ 2.08
HDLBP-220ENST00000442730 TNIP1Q15025 636 aa28.04■■■□□ 2.08
HDLBP-220ENST00000442730 IGHMBP2P38935 993 aaKnown RBP28.03■■■□□ 2.08
HDLBP-220ENST00000442730 DOK7Q18PE1 504 aa28.03■■■□□ 2.08
HDLBP-220ENST00000442730 DNAJC5GQ8N7S2 189 aa28.03■■■□□ 2.08
HDLBP-220ENST00000442730 ZC3H12CQ9C0D7 883 aaKnown RBP28.03■■■□□ 2.08
HDLBP-220ENST00000442730 SMC4Q9NTJ3 1288 aa28.03■■■□□ 2.08
HDLBP-220ENST00000442730 C9orf78Q9NZ63 289 aaPredicted RBP28.03■■■□□ 2.08
HDLBP-220ENST00000442730 EPHA10Q5JZY3 1008 aa28.02■■■□□ 2.08
HDLBP-220ENST00000442730 PASKQ96RG2 1323 aa28.01■■■□□ 2.07
HDLBP-220ENST00000442730 ATP2B4P23634 1241 aa28.01■■■□□ 2.07
HDLBP-220ENST00000442730 CLEC11AQ9Y240 323 aa28.01■■■□□ 2.07
HDLBP-220ENST00000442730 UTYO14607 1347 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 ANKRD18BA2A2Z9 1011 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 WTIPA6NIX2 430 aaPredicted RBP27.99■■■□□ 2.07
HDLBP-220ENST00000442730 PSMD14O00487 310 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 USP50Q70EL3 339 aaPredicted RBP27.99■■■□□ 2.07
HDLBP-220ENST00000442730 KCNQ5Q9NR82 932 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 ADARB2Q9NS39 739 aaKnown RBP27.99■■■□□ 2.07
HDLBP-220ENST00000442730 SCN9AQ15858 1988 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 MED23Q9ULK4 1368 aa27.99■■■□□ 2.07
HDLBP-220ENST00000442730 ITGBL1O95965 494 aaPredicted RBP27.98■■■□□ 2.07
HDLBP-220ENST00000442730 NBPF7P0C2Y1 421 aaPredicted RBP27.98■■■□□ 2.07
HDLBP-220ENST00000442730 IFIT5Q13325 482 aaKnown RBP27.98■■■□□ 2.07
HDLBP-220ENST00000442730 LMBR1LQ6UX01 489 aa27.98■■■□□ 2.07
HDLBP-220ENST00000442730 MPHOSPH8Q99549 860 aa27.98■■■□□ 2.07
HDLBP-220ENST00000442730 CHMP3Q9Y3E7 222 aa27.98■■■□□ 2.07
HDLBP-220ENST00000442730 CCT4P50991 539 aaKnown RBP27.97■■■□□ 2.07
HDLBP-220ENST00000442730 MAP1SQ66K74 1059 aaPredicted RBP27.97■■■□□ 2.07
HDLBP-220ENST00000442730 KAZALD1Q96I82 304 aa27.97■■■□□ 2.07
HDLBP-220ENST00000442730 SUCLG2Q96I99 432 aa27.96■■■□□ 2.07
HDLBP-220ENST00000442730 ZBTB12Q9Y330 459 aaPredicted RBP27.96■■■□□ 2.07
HDLBP-220ENST00000442730 SHTN1A0MZ66 631 aa27.95■■■□□ 2.06
HDLBP-220ENST00000442730 KLRG1Q96E93 195 aa27.95■■■□□ 2.06
HDLBP-220ENST00000442730 ANKRD2Q9GZV1 360 aa27.95■■■□□ 2.06
HDLBP-220ENST00000442730 A0A1B0GUL6 1792 aa27.94■■■□□ 2.06
HDLBP-220ENST00000442730 G3V3G9 751 aa27.94■■■□□ 2.06
HDLBP-220ENST00000442730 BRPF1P55201 1214 aaPredicted RBP27.94■■■□□ 2.06
HDLBP-220ENST00000442730 DCAF8Q5TAQ9 597 aa27.94■■■□□ 2.06
HDLBP-220ENST00000442730 CNTROBQ8N137 903 aa27.94■■■□□ 2.06
HDLBP-220ENST00000442730 DPF2Q92785 391 aa27.94■■■□□ 2.06
HDLBP-220ENST00000442730 ZNF609O15014 1411 aa27.93■■■□□ 2.06
HDLBP-220ENST00000442730 RPS12P25398 132 aaKnown RBP27.93■■■□□ 2.06
HDLBP-220ENST00000442730 HNRNPUQ00839 825 aaKnown RBP eCLIP27.93■■■□□ 2.06
HDLBP-220ENST00000442730 CHRNDQ07001 517 aa27.93■■■□□ 2.06
HDLBP-220ENST00000442730 MICALL2Q8IY33 904 aa27.93■■■□□ 2.06
HDLBP-220ENST00000442730 CREBZFQ9NS37 354 aa27.93■■■□□ 2.06
HDLBP-220ENST00000442730 CNOT7Q9UIV1 285 aaKnown RBP27.93■■■□□ 2.06
HDLBP-220ENST00000442730 LEMD3Q9Y2U8 911 aa27.93■■■□□ 2.06
HDLBP-220ENST00000442730 PSME4Q14997 1843 aa27.92■■■□□ 2.06
HDLBP-220ENST00000442730 RARSP54136 660 aaKnown RBP27.92■■■□□ 2.06
HDLBP-220ENST00000442730 CCDC57Q2TAC2 916 aa27.92■■■□□ 2.06
HDLBP-220ENST00000442730 TRPM4Q8TD43 1214 aa27.92■■■□□ 2.06
HDLBP-220ENST00000442730 ZNF804BA4D1E1 1349 aa27.92■■■□□ 2.06
HDLBP-220ENST00000442730 VIL1P09327 827 aaKnown RBP27.91■■■□□ 2.06
HDLBP-220ENST00000442730 NOB1Q9ULX3 412 aaKnown RBP27.91■■■□□ 2.06
HDLBP-220ENST00000442730 KLRK1P26718 216 aa27.9■■■□□ 2.06
HDLBP-220ENST00000442730 RABL6Q3YEC7 729 aaPredicted RBP27.9■■■□□ 2.06
HDLBP-220ENST00000442730 ZNF594Q96JF6 807 aaPredicted RBP27.9■■■□□ 2.06
HDLBP-220ENST00000442730 USP44Q9H0E7 712 aa27.9■■■□□ 2.06
HDLBP-220ENST00000442730 BICC1Q9H694 974 aaKnown RBP27.9■■■□□ 2.06
HDLBP-220ENST00000442730 H7C1D1 291 aa27.89■■■□□ 2.06
HDLBP-220ENST00000442730 HIRAP54198 1017 aaPredicted RBP27.89■■■□□ 2.06
HDLBP-220ENST00000442730 PODNQ7Z5L7 613 aa27.89■■■□□ 2.06
HDLBP-220ENST00000442730 TXNRD3Q86VQ6 643 aa27.89■■■□□ 2.06
HDLBP-220ENST00000442730 ANKRD44Q8N8A2 993 aa27.89■■■□□ 2.06
HDLBP-220ENST00000442730 TAF7LQ5H9L4 462 aa27.88■■■□□ 2.05
HDLBP-220ENST00000442730 ZNF646O15015 1829 aaPredicted RBP27.88■■■□□ 2.05
HDLBP-220ENST00000442730 KCNJ4P48050 445 aa27.87■■■□□ 2.05
HDLBP-220ENST00000442730 RSBN1LQ6PCB5 846 aaPredicted RBP27.87■■■□□ 2.05
HDLBP-220ENST00000442730 API5Q9BZZ5 524 aaKnown RBP27.87■■■□□ 2.05
HDLBP-220ENST00000442730 KIF16BQ96L93 1317 aa27.87■■■□□ 2.05
HDLBP-220ENST00000442730 IRS2Q9Y4H2 1338 aa27.87■■■□□ 2.05
HDLBP-220ENST00000442730 TAF5LO75529 589 aa27.86■■■□□ 2.05
HDLBP-220ENST00000442730 LDHAL6AQ6ZMR3 332 aa27.86■■■□□ 2.05
HDLBP-220ENST00000442730 HELBQ8NG08 1087 aaPredicted RBP27.86■■■□□ 2.05
HDLBP-220ENST00000442730 ZC3H15Q8WU90 426 aaKnown RBP27.86■■■□□ 2.05
HDLBP-220ENST00000442730 COA1Q9GZY4 146 aa27.86■■■□□ 2.05
HDLBP-220ENST00000442730 PGAP2Q9UHJ9 254 aa27.86■■■□□ 2.05
HDLBP-220ENST00000442730 USP17L3A6NCW0 530 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms