RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RTCBQ9Y3I0 505 aaKnown RBP6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 ACIN1Q9UKV3 1341 aaKnown RBP6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 EGFRP00533 1210 aa6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 NCLP19338 710 aaKnown RBP6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 MYO19Q96H55 970 aa6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
HMGB3P9-201ENST00000441799 LOC102724428A0A0B4J2F2 783 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L15C9J2P7 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L10C9JJH3 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L13C9JLJ4 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L12C9JPN9 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L11C9JVI0 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L21D6R901 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L18D6R9N7 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L22D6RA61 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L17D6RBQ6 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L19D6RCP7 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L20D6RJB6 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 FSTP19883 344 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 SIK1P57059 783 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 USP17L24Q0WX57 530 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 PLD4Q96BZ4 506 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 PSMD1Q99460 953 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 CECR2Q9BXF3 1484 aa6.57□□□□□ -1.36
HMGB3P9-201ENST00000441799 FAM196BA6NMK8 535 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 MED26O95402 600 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 EIF2AK2P19525 551 aaKnown RBP6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 SETDB1Q15047 1291 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 BRPF3Q9ULD4 1205 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 KCNMB2Q9Y691 235 aa6.56□□□□□ -1.36
HMGB3P9-201ENST00000441799 FOXO3O43524 673 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 MMP20O60882 483 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 XYLBO75191 536 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 SSTR4P31391 388 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 GDF6Q6KF10 455 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 Q6ZS46 218 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 SLC51AQ86UW1 340 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 IL22RA1Q8N6P7 574 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 VRTNQ9H8Y1 702 aa6.55□□□□□ -1.36
HMGB3P9-201ENST00000441799 HOXD8P13378 290 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 PROSER2Q86WR7 435 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 RGL4Q8IZJ4 473 aa6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 CMTR1Q8N1G2 835 aaKnown RBP6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 NSUN5Q96P11 429 aaKnown RBP6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
HMGB3P9-201ENST00000441799 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 ARID4AP29374 1257 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 CD97P48960 835 aa6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 IRX6P78412 446 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 SETQ01105 290 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 COX20Q5RI15 118 aa6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 TRIM33Q9UPN9 1127 aa6.53□□□□□ -1.36
HMGB3P9-201ENST00000441799 TM4SF5O14894 197 aa6.52□□□□□ -1.37
HMGB3P9-201ENST00000441799 PSAPP07602 524 aa6.52□□□□□ -1.37
HMGB3P9-201ENST00000441799 GALNT11Q8NCW6 608 aa6.52□□□□□ -1.37
HMGB3P9-201ENST00000441799 SOX18P35713 384 aa6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 FAM26DQ5JW98 314 aa6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 CERS3Q8IU89 383 aa6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 ETFBKMTQ8IXQ9 262 aa6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 CALR3Q96L12 384 aaKnown RBP6.51□□□□□ -1.37
HMGB3P9-201ENST00000441799 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 GHRHP01286 108 aa6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 DEKP35659 375 aaKnown RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 ADAMTSL4Q6UY14 1074 aa6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 IPO4Q8TEX9 1081 aaKnown RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 SRA1Q9HD15 236 aaKnown RBP6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 RAXQ9Y2V3 346 aa6.5□□□□□ -1.37
HMGB3P9-201ENST00000441799 BICRAQ9NZM4 1560 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 BTBD11A6QL63 1104 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 ADAMTS4O75173 837 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 WISP1O95388 367 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 TMED8Q6PL24 325 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 MAP4K3Q8IVH8 894 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 PLCD4Q9BRC7 762 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 SAP130Q9H0E3 1048 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 NAP1L2Q9ULW6 460 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P9-201ENST00000441799 NACADO15069 1562 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 KIAA1324LA8MWY0 1029 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 TGFB1P01137 390 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 GLB1P16278 677 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 CFAP70Q5T0N1 1121 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms