RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ST8SIA5O15466 376 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 XYLBO75191 536 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 XRCC5P13010 732 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 CTC1Q2NKJ3 1217 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 UBE2Q2Q8WVN8 375 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 AAASQ9NRG9 546 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 FBXO24O75426 580 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 HSD3B2P26439 372 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 GBP2P32456 591 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 EIF4A3P38919 411 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 VEGFBP49765 207 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 SMCPP49901 116 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 TYRO3Q06418 890 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 NFX1Q12986 1120 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 PTPROQ16827 1216 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 ANKS3Q6ZW76 656 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 MEIOBQ8N635 442 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
CDC42BPA-207ENST00000441725 SPATA31C2B4DYI2 1134 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 ARSJQ5FYB0 599 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 PEAR1Q5VY43 1037 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 HPS1Q92902 700 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 ZIC5Q96T25 663 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 CES1P23141 567 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 CTSOP43234 321 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 FCGRTP55899 365 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 POU4F2Q12837 409 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 FBXL19Q6PCT2 694 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 RELL1Q8IUW5 271 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 ZNF296Q8WUU4 475 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 KCNB2Q92953 911 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 TMEM74Q96NL1 305 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 SRPK1Q96SB4 655 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 EHD4Q9H223 541 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 KANSL3Q9P2N6 904 aa5.82□□□□□ -1.48
CDC42BPA-207ENST00000441725 A0A1W2PP55 124 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 AXIN1O15169 862 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 KLF4O43474 513 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 CYP2E1P05181 493 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 PWP1Q13610 501 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 MAP3K11Q16584 847 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 KIAA0319Q5VV43 1072 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 PRICKLE2Q7Z3G6 844 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 MKL1Q969V6 931 aa5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 POLMQ9NP87 494 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-207ENST00000441725 EPB42P16452 691 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 SOX9P48436 509 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 FAM160A1Q05DH4 1040 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 RAB33AQ14088 237 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 MICAL1Q8TDZ2 1067 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 HNRNPLLQ8WVV9 542 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 RHOVQ96L33 236 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 RNPC3Q96LT9 517 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 UBP1Q9NZI7 540 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 hCG_2014768A0A024R1R8 64 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 ENPP3O14638 875 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 SPINT1O43278 529 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 MARCH6O60337 910 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 EGFRP00533 1210 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 NLRP13Q86W25 1043 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 CEP63Q96MT8 703 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 OXCT2Q9BYC2 517 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 TRIM55Q9BYV6 548 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 ABCB6Q9NP58 842 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 SNTG2Q9NY99 539 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 TRAK1Q9UPV9 953 aa5.8□□□□□ -1.48
CDC42BPA-207ENST00000441725 IGBP1P78318 339 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 RASA3Q14644 834 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 PMEPA1Q969W9 287 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 TSEN34Q9BSV6 310 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 KCNQ5Q9NR82 932 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 PPP4R2Q9NY27 417 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 AKAP2Q9Y2D5 859 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 A0A1W2PNR3 127 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 FAM221BA6H8Z2 402 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 CLSTN1O94985 981 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 TTC39BQ5VTQ0 682 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 FAM9AQ8IZU1 332 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 PHC3Q8NDX5 983 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 NT5C1AQ9BXI3 368 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 DACH1Q9UI36 760 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 STRIP2Q9ULQ0 834 aa5.79□□□□□ -1.48
CDC42BPA-207ENST00000441725 CCDC85CA6NKD9 419 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 EDN3P14138 238 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 GARTP22102 1010 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 CRKP46108 304 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 PRPF40BQ6NWY9 871 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 DEPDC7Q96QD5 511 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 ZCCHC2Q9C0B9 1178 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 BRD7Q9NPI1 651 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 SALL4Q9UJQ4 1053 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 PPM1HQ9ULR3 514 aa5.78□□□□□ -1.48
CDC42BPA-207ENST00000441725 U2SURPO15042 1029 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 GREM1O60565 184 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 PF4P02776 101 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 CELA3AP09093 270 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms