RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 KCNQ3O43525 872 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 INHBEP58166 350 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 SCARF1Q14162 830 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 ARMC9Q7Z3E5 817 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC6-210ENST00000441703 GAS2L2Q8NHY3 880 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 PANK3Q9H999 370 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 PRDM6Q9NQX0 595 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-210ENST00000441703 STXBP5LQ9Y2K9 1186 aa8.42□□□□□ -1.06
HDAC6-210ENST00000441703 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-210ENST00000441703 G3V3G9 751 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 RIMBP2O15034 1052 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 ECE2O60344 883 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 SP3Q02447 781 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 SUSD4Q5VX71 490 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 OTUD7BQ6GQQ9 843 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 C3orf67Q6ZVT6 689 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 DDX46Q7L014 1031 aaKnown RBP8.41□□□□□ -1.06
HDAC6-210ENST00000441703 IFNL1Q8IU54 200 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 DEFB123Q8N688 67 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
HDAC6-210ENST00000441703 COL3A1P02461 1466 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-210ENST00000441703 MAP3K15Q6ZN16 1313 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-210ENST00000441703 NBPF26B4DH59 902 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 ERVV-1B6SEH8 477 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 PRKG1Q13976 671 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
HDAC6-210ENST00000441703 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 EYA3Q99504 573 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 PRO3102Q9H379 93 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.06
HDAC6-210ENST00000441703 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.07
HDAC6-210ENST00000441703 UBN2Q6ZU65 1347 aa8.39□□□□□ -1.07
HDAC6-210ENST00000441703 NTSR2O95665 410 aa8.39□□□□□ -1.07
HDAC6-210ENST00000441703 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
HDAC6-210ENST00000441703 GRAPQ13588 217 aa8.39□□□□□ -1.07
HDAC6-210ENST00000441703 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
HDAC6-210ENST00000441703 GRAPLQ8TC17 118 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-210ENST00000441703 SCAF8Q9UPN6 1271 aaKnown RBP8.39□□□□□ -1.07
HDAC6-210ENST00000441703 RTL9Q8NET4 1388 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 COL6A3P12111 3177 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 ZBTB7BO15156 539 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 VIL1P09327 827 aaKnown RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 COL9A1P20849 921 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 CRHR2Q13324 411 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 PARP10Q53GL7 1025 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 GPR153Q6NV75 609 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 MYOZ2Q9NPC6 264 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 ANGEL1Q9UNK9 670 aaKnown RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
HDAC6-210ENST00000441703 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 LAMB2P55268 1798 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 ANKRD36CQ5JPF3 1778 aa8.38□□□□□ -1.07
HDAC6-210ENST00000441703 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 IGF2BP3O00425 579 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC6-210ENST00000441703 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-210ENST00000441703 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-210ENST00000441703 Q7L0L9 218 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 AGBL3Q8NEM8 1001 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 NECTIN2Q92692 538 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
HDAC6-210ENST00000441703 KCNQ5Q9NR82 932 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 KDM3BQ7LBC6 1761 aa8.37□□□□□ -1.07
HDAC6-210ENST00000441703 DUOX1Q9NRD9 1551 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 EVI5O60447 810 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 USP17L8P0C7I0 530 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 ZBTB48P10074 688 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-210ENST00000441703 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-210ENST00000441703 TTLL7Q6ZT98 887 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 ZNF34Q8IZ26 560 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
HDAC6-210ENST00000441703 MTMR10Q9NXD2 777 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 STAP2Q9UGK3 403 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 RRP7AQ9Y3A4 280 aaKnown RBP8.36□□□□□ -1.07
HDAC6-210ENST00000441703 BRCA2P51587 3418 aa8.36□□□□□ -1.07
HDAC6-210ENST00000441703 MYL6BP14649 208 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 KIF22Q14807 665 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 SLC10A5Q5PT55 438 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
HDAC6-210ENST00000441703 RTF1Q92541 710 aaKnown RBP8.35□□□□□ -1.07
HDAC6-210ENST00000441703 FAM122AQ96E09 287 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 HTTP42858 3142 aa8.35□□□□□ -1.07
HDAC6-210ENST00000441703 CENPFP49454 3210 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 U2SURPO15042 1029 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms