RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NBPF7P0C2Y1 421 aaPredicted RBP29.87■■■□□ 2.37
VARS-217ENST00000440048 IGHMBP2P38935 993 aaKnown RBP29.87■■■□□ 2.37
VARS-217ENST00000440048 GPR101Q96P66 508 aaPredicted RBP29.87■■■□□ 2.37
VARS-217ENST00000440048 EYA3Q99504 573 aa29.87■■■□□ 2.37
VARS-217ENST00000440048 GGA1Q9UJY5 639 aa29.87■■■□□ 2.37
VARS-217ENST00000440048 UTYO14607 1347 aa29.87■■■□□ 2.37
VARS-217ENST00000440048 IQCA1LA6NCM1 817 aa29.86■■■□□ 2.37
VARS-217ENST00000440048 UFL1O94874 794 aa29.86■■■□□ 2.37
VARS-217ENST00000440048 LMBR1LQ6UX01 489 aa29.86■■■□□ 2.37
VARS-217ENST00000440048 MINPP1Q9UNW1 487 aa29.86■■■□□ 2.37
VARS-217ENST00000440048 XDHP47989 1333 aa29.86■■■□□ 2.37
VARS-217ENST00000440048 ANKRD18BA2A2Z9 1011 aa29.85■■■□□ 2.37
VARS-217ENST00000440048 SUCLG2Q96I99 432 aa29.85■■■□□ 2.37
VARS-217ENST00000440048 CHMP3Q9Y3E7 222 aa29.85■■■□□ 2.37
VARS-217ENST00000440048 CXCL9Q07325 125 aa29.84■■■□□ 2.37
VARS-217ENST00000440048 KAZALD1Q96I82 304 aa29.84■■■□□ 2.37
VARS-217ENST00000440048 IFIT5Q13325 482 aaKnown RBP29.83■■■□□ 2.37
VARS-217ENST00000440048 MPHOSPH8Q99549 860 aa29.83■■■□□ 2.37
VARS-217ENST00000440048 API5Q9BZZ5 524 aaKnown RBP29.83■■■□□ 2.37
VARS-217ENST00000440048 TAF1DQ9H5J8 278 aaPredicted RBP29.83■■■□□ 2.37
VARS-217ENST00000440048 HACL1Q9UJ83 578 aa29.83■■■□□ 2.37
VARS-217ENST00000440048 YDJCA8MPS7 323 aa29.82■■■□□ 2.36
VARS-217ENST00000440048 ATP2B4P23634 1241 aa29.82■■■□□ 2.36
VARS-217ENST00000440048 ZC3H12CQ9C0D7 883 aaKnown RBP29.82■■■□□ 2.36
VARS-217ENST00000440048 USP44Q9H0E7 712 aa29.82■■■□□ 2.36
VARS-217ENST00000440048 DBNDD1Q9H9R9 158 aa29.82■■■□□ 2.36
VARS-217ENST00000440048 KIF16BQ96L93 1317 aa29.81■■■□□ 2.36
VARS-217ENST00000440048 RAD17O75943 681 aa29.8■■■□□ 2.36
VARS-217ENST00000440048 CCT4P50991 539 aaKnown RBP29.8■■■□□ 2.36
VARS-217ENST00000440048 DOK7Q18PE1 504 aa29.8■■■□□ 2.36
VARS-217ENST00000440048 CIAPIN1Q6FI81 312 aa29.8■■■□□ 2.36
VARS-217ENST00000440048 WTIPA6NIX2 430 aaPredicted RBP29.79■■■□□ 2.36
VARS-217ENST00000440048 BCAR3O75815 825 aa29.79■■■□□ 2.36
VARS-217ENST00000440048 CCDC57Q2TAC2 916 aa29.79■■■□□ 2.36
VARS-217ENST00000440048 ARHGAP45Q92619 1136 aa29.79■■■□□ 2.36
VARS-217ENST00000440048 ECE2O60344 883 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 POTEIP0CG38 1075 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 POTEJP0CG39 1038 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 EPHX2P34913 555 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 SCNN1DP51172 638 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 TNIP1Q15025 636 aa29.78■■■□□ 2.36
VARS-217ENST00000440048 BICC1Q9H694 974 aaKnown RBP29.77■■■□□ 2.36
VARS-217ENST00000440048 LMOD1P29536 600 aaPredicted RBP29.76■■■□□ 2.35
VARS-217ENST00000440048 ZNF594Q96JF6 807 aaPredicted RBP29.76■■■□□ 2.35
VARS-217ENST00000440048 ANKRD2Q9GZV1 360 aa29.76■■■□□ 2.35
VARS-217ENST00000440048 EPS15P42566 896 aa29.75■■■□□ 2.35
VARS-217ENST00000440048 CHRNDQ07001 517 aa29.75■■■□□ 2.35
VARS-217ENST00000440048 RABL6Q3YEC7 729 aaPredicted RBP29.75■■■□□ 2.35
VARS-217ENST00000440048 TAF7LQ5H9L4 462 aa29.75■■■□□ 2.35
VARS-217ENST00000440048 ANKRD44Q8N8A2 993 aa29.75■■■□□ 2.35
VARS-217ENST00000440048 SCN9AQ15858 1988 aa29.75■■■□□ 2.35
VARS-217ENST00000440048 G3V3G9 751 aa29.74■■■□□ 2.35
VARS-217ENST00000440048 GMPSP49915 693 aaPredicted RBP29.74■■■□□ 2.35
VARS-217ENST00000440048 EAPPQ56P03 285 aaPredicted RBP29.74■■■□□ 2.35
VARS-217ENST00000440048 DCAF8Q5TAQ9 597 aa29.74■■■□□ 2.35
VARS-217ENST00000440048 KCNQ5Q9NR82 932 aa29.74■■■□□ 2.35
VARS-217ENST00000440048 LEMD3Q9Y2U8 911 aa29.74■■■□□ 2.35
VARS-217ENST00000440048 A0A1B0GUL6 1792 aa29.74■■■□□ 2.35
VARS-217ENST00000440048 IPO8O15397 1037 aaKnown RBP29.73■■■□□ 2.35
VARS-217ENST00000440048 CHADLQ6NUI6 762 aa29.73■■■□□ 2.35
VARS-217ENST00000440048 LDHDQ86WU2 507 aa29.73■■■□□ 2.35
VARS-217ENST00000440048 GPRC5DQ9NZD1 345 aa29.73■■■□□ 2.35
VARS-217ENST00000440048 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
VARS-217ENST00000440048 PSMD14O00487 310 aa29.72■■■□□ 2.35
VARS-217ENST00000440048 LDHAL6AQ6ZMR3 332 aa29.72■■■□□ 2.35
VARS-217ENST00000440048 PNMA8AQ86V59 439 aaPredicted RBP29.72■■■□□ 2.35
VARS-217ENST00000440048 FRAT1Q92837 279 aaPredicted RBP29.72■■■□□ 2.35
VARS-217ENST00000440048 ADAMTSL1Q8N6G6 1762 aa29.72■■■□□ 2.35
VARS-217ENST00000440048 ZNF804BA4D1E1 1349 aa29.71■■■□□ 2.35
VARS-217ENST00000440048 DNAJC5GQ8N7S2 189 aa29.71■■■□□ 2.35
VARS-217ENST00000440048 TRIM27P14373 513 aa29.7■■■□□ 2.35
VARS-217ENST00000440048 INTS3Q68E01 1043 aaKnown RBP29.7■■■□□ 2.35
VARS-217ENST00000440048 ATF7IPQ6VMQ6 1270 aa29.7■■■□□ 2.35
VARS-217ENST00000440048 HELBQ8NG08 1087 aaPredicted RBP29.7■■■□□ 2.35
VARS-217ENST00000440048 CNNM1Q9NRU3 951 aa29.7■■■□□ 2.35
VARS-217ENST00000440048 TNNQ9UQP3 1299 aa29.7■■■□□ 2.35
VARS-217ENST00000440048 CLEC11AQ9Y240 323 aa29.69■■■□□ 2.34
VARS-217ENST00000440048 ZBTB12Q9Y330 459 aaPredicted RBP29.69■■■□□ 2.34
VARS-217ENST00000440048 PSME4Q14997 1843 aa29.68■■■□□ 2.34
VARS-217ENST00000440048 TAF5LO75529 589 aa29.68■■■□□ 2.34
VARS-217ENST00000440048 UBTFL1P0CB47 393 aaPredicted RBP29.68■■■□□ 2.34
VARS-217ENST00000440048 KCNJ4P48050 445 aa29.68■■■□□ 2.34
VARS-217ENST00000440048 TXNRD3Q86VQ6 643 aa29.68■■■□□ 2.34
VARS-217ENST00000440048 KLRK1P26718 216 aa29.67■■■□□ 2.34
VARS-217ENST00000440048 ADARB2Q9NS39 739 aaKnown RBP29.67■■■□□ 2.34
VARS-217ENST00000440048 SNAP23O00161 211 aa29.66■■■□□ 2.34
VARS-217ENST00000440048 USP50Q70EL3 339 aaPredicted RBP29.66■■■□□ 2.34
VARS-217ENST00000440048 PODNQ7Z5L7 613 aa29.66■■■□□ 2.34
VARS-217ENST00000440048 PUS3Q9BZE2 481 aaKnown RBP29.66■■■□□ 2.34
VARS-217ENST00000440048 VIL1P09327 827 aaKnown RBP29.65■■■□□ 2.34
VARS-217ENST00000440048 DPF2Q92785 391 aa29.65■■■□□ 2.34
VARS-217ENST00000440048 MEIS3Q99687 375 aa29.65■■■□□ 2.34
VARS-217ENST00000440048 CNOT7Q9UIV1 285 aaKnown RBP29.65■■■□□ 2.34
VARS-217ENST00000440048 SHTN1A0MZ66 631 aa29.64■■■□□ 2.34
VARS-217ENST00000440048 PLIN1O60240 522 aa29.64■■■□□ 2.34
VARS-217ENST00000440048 ZKSCAN2Q63HK3 967 aa29.64■■■□□ 2.34
VARS-217ENST00000440048 CLUAP1Q96AJ1 413 aa29.64■■■□□ 2.34
VARS-217ENST00000440048 COA1Q9GZY4 146 aa29.64■■■□□ 2.34
VARS-217ENST00000440048 RPS12P25398 132 aaKnown RBP29.63■■■□□ 2.33
VARS-217ENST00000440048 KLRG1Q96E93 195 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms