RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 GGA1Q9UJY5 639 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 CACNA1FO60840 1977 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 H7C1W4 665 aa20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 HSPA1AP0DMV8 641 aaKnown RBP20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 HSPA1BP0DMV9 641 aaKnown RBP20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 GCKRQ14397 625 aa20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 DPF2Q92785 391 aa20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 MYH3P11055 1940 aa20.8■□□□□ 0.92
SNRPD3-204ENST00000439775 XDHP47989 1333 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 RASSF10A6NK89 507 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 PSMD14O00487 310 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 LINS1Q8NG48 757 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 ZC3H15Q8WU90 426 aaKnown RBP20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 ZC3H12CQ9C0D7 883 aaKnown RBP20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 PGAP2Q9UHJ9 254 aa20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 CNOT7Q9UIV1 285 aaKnown RBP20.79■□□□□ 0.92
SNRPD3-204ENST00000439775 RPS12P25398 132 aaKnown RBP20.78■□□□□ 0.92
SNRPD3-204ENST00000439775 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
SNRPD3-204ENST00000439775 GREM2Q9H772 168 aa20.78■□□□□ 0.92
SNRPD3-204ENST00000439775 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
SNRPD3-204ENST00000439775 H7C1D1 291 aa20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 CASP7P55210 303 aa20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 DOK7Q18PE1 504 aa20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 TRPM4Q8TD43 1214 aa20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 BSDC1Q9NW68 430 aaPredicted RBP20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 ZBTB12Q9Y330 459 aaPredicted RBP20.77■□□□□ 0.92
SNRPD3-204ENST00000439775 ZNF609O15014 1411 aa20.77■□□□□ 0.91
SNRPD3-204ENST00000439775 VEGFBP49765 207 aa20.76■□□□□ 0.91
SNRPD3-204ENST00000439775 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
SNRPD3-204ENST00000439775 SHTN1A0MZ66 631 aa20.75■□□□□ 0.91
SNRPD3-204ENST00000439775 TRAF5O00463 557 aa20.75■□□□□ 0.91
SNRPD3-204ENST00000439775 ATP2B4P23634 1241 aa20.75■□□□□ 0.91
SNRPD3-204ENST00000439775 ABT1Q9ULW3 272 aaKnown RBP20.75■□□□□ 0.91
SNRPD3-204ENST00000439775 VIL1P09327 827 aaKnown RBP20.74■□□□□ 0.91
SNRPD3-204ENST00000439775 FMR1Q06787 632 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNRPD3-204ENST00000439775 DEFB115Q30KQ5 88 aa20.74■□□□□ 0.91
SNRPD3-204ENST00000439775 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
SNRPD3-204ENST00000439775 MED23Q9ULK4 1368 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 TRPM7Q96QT4 1865 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 G3V3G9 751 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 CSF1RP07333 972 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 COL13A1Q5TAT6 717 aaPredicted RBP20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 CST9Q5W186 159 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 MINPP1Q9UNW1 487 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
SNRPD3-204ENST00000439775 THSD7BQ9C0I4 1608 aa20.72■□□□□ 0.91
SNRPD3-204ENST00000439775 ITGA6P23229 1130 aa20.72■□□□□ 0.91
SNRPD3-204ENST00000439775 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
SNRPD3-204ENST00000439775 BEND3Q5T5X7 828 aa20.72■□□□□ 0.91
SNRPD3-204ENST00000439775 GLIS2Q9BZE0 524 aaPredicted RBP20.72■□□□□ 0.91
SNRPD3-204ENST00000439775 SPEF2Q9C093 1822 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 F6X3S4 739 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 IGHMBP2P38935 993 aaKnown RBP20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 CDC37L1Q7L3B6 337 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 SAMD7Q7Z3H4 446 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 PODNQ7Z5L7 613 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 TLL2Q9Y6L7 1015 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 PSME4Q14997 1843 aa20.71■□□□□ 0.91
SNRPD3-204ENST00000439775 CCT4P50991 539 aaKnown RBP20.7■□□□□ 0.9
SNRPD3-204ENST00000439775 AGBL3Q8NEM8 1001 aa20.7■□□□□ 0.9
SNRPD3-204ENST00000439775 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
SNRPD3-204ENST00000439775 CELF2O95319 508 aaKnown RBP20.69■□□□□ 0.9
SNRPD3-204ENST00000439775 EGFRP00533 1210 aa20.69■□□□□ 0.9
SNRPD3-204ENST00000439775 TBC1D10BQ4KMP7 808 aaPredicted RBP20.69■□□□□ 0.9
SNRPD3-204ENST00000439775 RSBN1LQ6PCB5 846 aaPredicted RBP20.69■□□□□ 0.9
SNRPD3-204ENST00000439775 LEMD3Q9Y2U8 911 aa20.69■□□□□ 0.9
SNRPD3-204ENST00000439775 MPHOSPH8Q99549 860 aa20.68■□□□□ 0.9
SNRPD3-204ENST00000439775 ANKRD2Q9GZV1 360 aa20.68■□□□□ 0.9
SNRPD3-204ENST00000439775 WTIPA6NIX2 430 aaPredicted RBP20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 ECE1P42892 770 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 ZNF280AP59817 542 aaPredicted RBP20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 KIF4BQ2VIQ3 1234 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 SAPCD2Q86UD0 394 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 HHIPL1Q96JK4 782 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 WBP1LQ9NX94 342 aa20.67■□□□□ 0.9
SNRPD3-204ENST00000439775 ANKRD18BA2A2Z9 1011 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 USP17L3A6NCW0 530 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 USP17L4A6NCW7 530 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 FOXN1O15353 648 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 FOXO4P98177 505 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 USP17L1Q7RTZ2 530 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 AIDAQ96BJ3 306 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 GMLQ99445 158 aa20.66■□□□□ 0.9
SNRPD3-204ENST00000439775 E9PSI1 815 aa20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 GRM8O00222 908 aa20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 ALDH1L1O75891 902 aa20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 MAP2K1Q02750 393 aaPredicted RBP20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 KRT26Q7Z3Y9 468 aa20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 COA1Q9GZY4 146 aa20.65■□□□□ 0.9
SNRPD3-204ENST00000439775 ZNF804BA4D1E1 1349 aa20.64■□□□□ 0.89
SNRPD3-204ENST00000439775 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.89
SNRPD3-204ENST00000439775 RBM26Q5T8P6 1007 aaKnown RBP20.64■□□□□ 0.89
SNRPD3-204ENST00000439775 CYP4F22Q6NT55 531 aa20.64■□□□□ 0.89
SNRPD3-204ENST00000439775 USP48Q86UV5 1035 aa20.64■□□□□ 0.89
SNRPD3-204ENST00000439775 DCPSQ96C86 337 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms