RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DPP8Q6V1X1 898 aaPredicted RBP22.29■■□□□ 1.16
CCDC188-201ENST00000439765 PNMA8AQ86V59 439 aaPredicted RBP22.29■■□□□ 1.16
CCDC188-201ENST00000439765 NIM1KQ8IY84 436 aa22.29■■□□□ 1.16
CCDC188-201ENST00000439765 CHMP3Q9Y3E7 222 aa22.29■■□□□ 1.16
CCDC188-201ENST00000439765 PASKQ96RG2 1323 aa22.29■■□□□ 1.16
CCDC188-201ENST00000439765 ANKRD18AQ8IVF6 992 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 MPNDQ8N594 471 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 FOXO4P98177 505 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 AOC3Q16853 763 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 EPHA10Q5JZY3 1008 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 SUCLG2Q96I99 432 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 CDC5LQ99459 802 aaKnown RBP22.28■■□□□ 1.16
CCDC188-201ENST00000439765 CREBZFQ9NS37 354 aa22.28■■□□□ 1.16
CCDC188-201ENST00000439765 TRIM27P14373 513 aa22.27■■□□□ 1.16
CCDC188-201ENST00000439765 ITGA6P23229 1130 aa22.27■■□□□ 1.16
CCDC188-201ENST00000439765 CCT4P50991 539 aaKnown RBP22.27■■□□□ 1.16
CCDC188-201ENST00000439765 EAPPQ56P03 285 aaPredicted RBP22.27■■□□□ 1.16
CCDC188-201ENST00000439765 TNNQ9UQP3 1299 aa22.27■■□□□ 1.16
CCDC188-201ENST00000439765 GJA3Q9Y6H8 435 aa22.27■■□□□ 1.16
CCDC188-201ENST00000439765 UTYO14607 1347 aa22.27■■□□□ 1.16
CCDC188-201ENST00000439765 ITGBL1O95965 494 aaPredicted RBP22.26■■□□□ 1.15
CCDC188-201ENST00000439765 SCNN1DP51172 638 aa22.26■■□□□ 1.15
CCDC188-201ENST00000439765 ARHGAP45Q92619 1136 aa22.26■■□□□ 1.15
CCDC188-201ENST00000439765 NSFL1CQ9UNZ2 370 aaKnown RBP22.26■■□□□ 1.15
CCDC188-201ENST00000439765 CSF1RP07333 972 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 KIAA2012Q0VF49 1180 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 LMBR1LQ6UX01 489 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 ATF7IPQ6VMQ6 1270 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 USP44Q9H0E7 712 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 ZNRF3Q9ULT6 936 aa22.25■■□□□ 1.15
CCDC188-201ENST00000439765 IPO8O15397 1037 aaKnown RBP22.24■■□□□ 1.15
CCDC188-201ENST00000439765 LMOD1P29536 600 aaPredicted RBP22.24■■□□□ 1.15
CCDC188-201ENST00000439765 GPSM2P81274 684 aa22.24■■□□□ 1.15
CCDC188-201ENST00000439765 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
CCDC188-201ENST00000439765 KAZALD1Q96I82 304 aa22.24■■□□□ 1.15
CCDC188-201ENST00000439765 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
CCDC188-201ENST00000439765 PSME4Q14997 1843 aa22.23■■□□□ 1.15
CCDC188-201ENST00000439765 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
CCDC188-201ENST00000439765 BICC1Q9H694 974 aaKnown RBP22.22■■□□□ 1.15
CCDC188-201ENST00000439765 ANKIB1Q9P2G1 1089 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 SCN9AQ15858 1988 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 ANKRD18BA2A2Z9 1011 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 CXCL9Q07325 125 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 IFIT5Q13325 482 aaKnown RBP22.22■■□□□ 1.15
CCDC188-201ENST00000439765 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 CLEC11AQ9Y240 323 aa22.22■■□□□ 1.15
CCDC188-201ENST00000439765 C6orf229H3BNL8 230 aa22.21■■□□□ 1.15
CCDC188-201ENST00000439765 EPS15P42566 896 aa22.21■■□□□ 1.15
CCDC188-201ENST00000439765 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
CCDC188-201ENST00000439765 GPR101Q96P66 508 aaPredicted RBP22.21■■□□□ 1.15
CCDC188-201ENST00000439765 BSDC1Q9NW68 430 aaPredicted RBP22.21■■□□□ 1.15
CCDC188-201ENST00000439765 POLR2AP24928 1970 aaKnown RBP22.2■■□□□ 1.14
CCDC188-201ENST00000439765 UFL1O94874 794 aa22.2■■□□□ 1.14
CCDC188-201ENST00000439765 CNTROBQ8N137 903 aa22.2■■□□□ 1.14
CCDC188-201ENST00000439765 MPHOSPH8Q99549 860 aa22.2■■□□□ 1.14
CCDC188-201ENST00000439765 POLLQ9UGP5 575 aa22.2■■□□□ 1.14
CCDC188-201ENST00000439765 XDHP47989 1333 aa22.19■■□□□ 1.14
CCDC188-201ENST00000439765 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
CCDC188-201ENST00000439765 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
CCDC188-201ENST00000439765 MAP1SQ66K74 1059 aaPredicted RBP22.19■■□□□ 1.14
CCDC188-201ENST00000439765 INTS3Q68E01 1043 aaKnown RBP22.19■■□□□ 1.14
CCDC188-201ENST00000439765 USP50Q70EL3 339 aaPredicted RBP22.19■■□□□ 1.14
CCDC188-201ENST00000439765 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
CCDC188-201ENST00000439765 MEIS3Q99687 375 aa22.19■■□□□ 1.14
CCDC188-201ENST00000439765 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
CCDC188-201ENST00000439765 TMEM88BA6NKF7 163 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 TAF7LQ5H9L4 462 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 CIAPIN1Q6FI81 312 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 TBC1D16Q8TBP0 767 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 ZNF594Q96JF6 807 aaPredicted RBP22.18■■□□□ 1.14
CCDC188-201ENST00000439765 PODXL2Q9NZ53 605 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 GGA1Q9UJY5 639 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 MINPP1Q9UNW1 487 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 CNTNAP1P78357 1384 aa22.18■■□□□ 1.14
CCDC188-201ENST00000439765 RIMBP2O15034 1052 aa22.17■■□□□ 1.14
CCDC188-201ENST00000439765 RABL6Q3YEC7 729 aaPredicted RBP22.17■■□□□ 1.14
CCDC188-201ENST00000439765 FTSJ3Q8IY81 847 aaKnown RBP22.17■■□□□ 1.14
CCDC188-201ENST00000439765 YDJCA8MPS7 323 aa22.16■■□□□ 1.14
CCDC188-201ENST00000439765 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
CCDC188-201ENST00000439765 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
CCDC188-201ENST00000439765 ADARB2Q9NS39 739 aaKnown RBP22.16■■□□□ 1.14
CCDC188-201ENST00000439765 TNIP1Q15025 636 aa22.15■■□□□ 1.14
CCDC188-201ENST00000439765 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
CCDC188-201ENST00000439765 LRRFIP2Q9Y608 721 aaKnown RBP22.15■■□□□ 1.14
CCDC188-201ENST00000439765 GMPSP49915 693 aaPredicted RBP22.15■■□□□ 1.14
CCDC188-201ENST00000439765 EYA3Q99504 573 aa22.15■■□□□ 1.14
CCDC188-201ENST00000439765 WTIPA6NIX2 430 aaPredicted RBP22.14■■□□□ 1.13
CCDC188-201ENST00000439765 RAD17O75943 681 aa22.14■■□□□ 1.13
CCDC188-201ENST00000439765 RLBP1P12271 317 aa22.14■■□□□ 1.13
CCDC188-201ENST00000439765 CHRNDQ07001 517 aa22.14■■□□□ 1.13
CCDC188-201ENST00000439765 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.13
CCDC188-201ENST00000439765 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
CCDC188-201ENST00000439765 HSPA1AP0DMV8 641 aaKnown RBP22.13■■□□□ 1.13
CCDC188-201ENST00000439765 HSPA1BP0DMV9 641 aaKnown RBP22.13■■□□□ 1.13
CCDC188-201ENST00000439765 LDHAL6AQ6ZMR3 332 aa22.13■■□□□ 1.13
CCDC188-201ENST00000439765 CNNM1Q9NRU3 951 aa22.13■■□□□ 1.13
CCDC188-201ENST00000439765 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
CCDC188-201ENST00000439765 ATP2B4P23634 1241 aa22.12■■□□□ 1.13
CCDC188-201ENST00000439765 GNAI3P08754 354 aa22.11■■□□□ 1.13
CCDC188-201ENST00000439765 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms