RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HYPKQ9NX55 129 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 DBF4Q9UBU7 674 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 WNK3Q9BYP7 1800 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 SPATA31A1Q5TZJ5 1347 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 KDM2BQ8NHM5 1336 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 NRAPQ86VF7 1730 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 SHANK3Q9BYB0 1731 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 ZBTB7BO15156 539 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 DDX58O95786 925 aaKnown RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 SNRPA1P09661 255 aaKnown RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 EIF2S2P20042 333 aaKnown RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 FLIIQ13045 1269 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 FKBP5Q13451 457 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 HDAC1Q13547 482 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 DESI1Q6ICB0 168 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 UNC5CLQ8IV45 518 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 DDX54Q8TDD1 881 aaKnown RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 NGLY1Q96IV0 654 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 TEX13AQ9BXU3 409 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 TMOD3Q9NYL9 352 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 USP35Q9P2H5 1018 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 TNNQ9UQP3 1299 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 PXDNLA1KZ92 1463 aa4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 N4BP2Q86UW6 1770 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P37-201ENST00000439613 ERBB4Q15303 1308 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 SPATA31A5Q5VU36 1347 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 SPATA31A7Q8IWB4 1347 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 DISP2A7MBM2 1401 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 SLIT2O94813 1529 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 KCNQ3O43525 872 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 GNAI3P08754 354 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 USP17L8P0C7I0 530 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 JUNDP17535 347 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 GGCXP38435 758 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 CTDSPL2Q05D32 466 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 VPS72Q15906 364 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 DDB1Q16531 1140 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 TMEM259Q4ZIN3 620 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 G2E3Q7L622 706 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 RPAP2Q8IXW5 612 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 FNBP4Q8N3X1 1017 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 LRRN4Q8WUT4 740 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 DDX21Q9NR30 783 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 ITGB4P16144 1822 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 LRP6O75581 1613 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 RGS12O14924 1447 aa4.97□□□□□ -1.61
HMGB1P37-201ENST00000439613 LAMB4A4D0S4 1761 aa4.96□□□□□ -1.61
HMGB1P37-201ENST00000439613 UBR2Q8IWV8 1755 aa4.96□□□□□ -1.61
HMGB1P37-201ENST00000439613 IBTKQ9P2D0 1353 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 HMMRO75330 724 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 ALDH1L1O75891 902 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 S1PR4O95977 384 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 IGHDP01880 384 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 MMP16P51512 607 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 SLC39A6Q13433 755 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 MCM6Q14566 821 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 PPP1R18Q6NYC8 613 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 SLC4A10Q6U841 1118 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 HELBQ8NG08 1087 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 GCC1Q96CN9 775 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 ZNF496Q96IT1 587 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 HMX1Q9NP08 348 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 CHPF2Q9P2E5 772 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 CCDC9Q9Y3X0 531 aaKnown RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 PAPPAQ13219 1627 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 TNS2Q63HR2 1409 aa4.96□□□□□ -1.62
HMGB1P37-201ENST00000439613 DXOO77932 396 aaKnown RBP4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 GNAI2P04899 355 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 HSPA1LP34931 641 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 NEXNQ0ZGT2 675 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 MEX3CQ5U5Q3 659 aaKnown RBP4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 LYPD8Q6UX82 237 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 KSR2Q6VAB6 950 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 SMC5Q8IY18 1101 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 ANKRD44Q8N8A2 993 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 MTMR14Q8NCE2 650 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 DNAAF4Q8WXU2 420 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 POM121Q96HA1 1249 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 C8orf37Q96NL8 207 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 SRCIN1Q9C0H9 1055 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 ATP10DQ9P241 1426 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 C5P01031 1676 aa4.95□□□□□ -1.62
HMGB1P37-201ENST00000439613 TOGARAM1Q9Y4F4 1720 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 BCL9LQ86UU0 1499 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 PI4KAP2A4QPH2 592 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 RNF223E7ERA6 249 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 F6X3S4 739 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 PPEF1O14829 653 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 STARD3NLO95772 234 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 PI4KAP1Q8N8J0 262 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 BANK1Q8NDB2 785 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 LINS1Q8NG48 757 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 EPS8L1Q8TE68 723 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 PIGBQ92521 554 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 SMARCC1Q92922 1105 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 DCTPP1Q9H773 170 aa4.94□□□□□ -1.62
HMGB1P37-201ENST00000439613 PHAXQ9H814 394 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms