RNA–Protein interactions for RNA: ENST00000439308.6

TUBGCP6-204, Transcript of tubulin gamma complex associated protein 6, human

TSL 1 (best) BASIC

Gene TUBGCP6, Length 6,078 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBGCP6-204	ENST00000439308	CCDC97	Q96F63	343 aa	Predicted RBP	18.85	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	TOP1	P11387	765 aa	Known RBP	18.85	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	MBIP	Q9NS73	344 aa		18.85	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	IVNS1ABP	Q9Y6Y0	642 aa		18.85	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	CALML4	Q96GE6	196 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	CEP63	Q96MT8	703 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	GNAQ	P50148	359 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	JARID2	Q92833	1246 aa	Predicted RBP	18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	FERMT2	Q96AC1	680 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	GSDMD	P57764	484 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	SLC4A4	Q9Y6R1	1079 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	CEP170	Q5SW79	1584 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	SSR1	P43307	286 aa	Known RBP	18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	RNMT	O43148	476 aa	Known RBP	18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	FAM196A	Q6ZSG2	479 aa		18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	C16orf45	Q96MC5	204 aa	Predicted RBP	18.84	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	PRIM1	P49642	420 aa	Known RBP	18.83	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	ERMN	Q8TAM6	284 aa		18.83	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	CEP135	Q66GS9	1140 aa		18.83	■□□□□ 0.61
TUBGCP6-204	ENST00000439308	MAGEB6P1	A0A0J9YX57	407 aa		18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	FAM83G	A6ND36	823 aa		18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CETN1	Q12798	172 aa		18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	UVSSA	Q2YD98	709 aa		18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ANXA1	P04083	346 aa		18.83	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GRM8	O00222	908 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	KRT222	Q8N1A0	295 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	NOD1	Q9Y239	953 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	STAMBP	O95630	424 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	LMBR1L	Q6UX01	489 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CTAGE5	O15320	804 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	NCOA7	Q8NI08	942 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SMARCC2	Q8TAQ2	1214 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ESR2	Q92731	530 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CNNM2	Q9H8M5	875 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GOPC	Q9HD26	462 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	IVL	P07476	585 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	C8orf76	Q96K31	380 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GTPBP4	Q9BZE4	634 aa	Known RBP	18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	LRRC27	Q9C0I9	530 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TCP11L1	Q9NUJ3	509 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	WDR97	A6NE52	1622 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ECM2	O94769	699 aa	Predicted RBP	18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TTC6	Q86TZ1	520 aa		18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TNPO1	Q92973	898 aa	Known RBP	18.82	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	IRX3	P78415	501 aa	Predicted RBP	18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	AMPD3	Q01432	767 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CCDC82	Q8N4S0	544 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	LUZP1	Q86V48	1076 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ATP7A	Q04656	1500 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SMARCA5	O60264	1052 aa	Predicted RBP	18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	BICD1	Q96G01	975 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GNAT2	P19087	354 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SPATA24	Q86W54	205 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TMTC2	Q8N394	836 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	RALGAPB	Q86X10	1494 aa		18.81	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ADCY5	O95622	1261 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CCDC175	P0C221	793 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	MNAT1	P51948	309 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	USP25	Q9UHP3	1055 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SNW1	Q13573	536 aa	Known RBP	18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TRMT1	Q9NXH9	659 aa	Known RBP	18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	DENND2A	Q9ULE3	1009 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GOLGA6L9	A6NEM1	432 aa		18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	GPHN	Q9NQX3	736 aa	Predicted RBP	18.8	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TMEM2	Q9UHN6	1383 aa		18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	BBX	Q8WY36	941 aa	Predicted RBP	18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TMX1	Q9H3N1	280 aa		18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SSFA2	P28290	1259 aa		18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	RFX1	P22670	979 aa		18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	RBM25	P49756	843 aa	Known RBP	18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	FKBP15	Q5T1M5	1219 aa		18.79	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	IFIT1B	Q5T764	474 aa	Known RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SPECC1L	Q69YQ0	1117 aa		18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SYCP3	Q8IZU3	236 aa		18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	PBRM1	Q86U86	1689 aa		18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	RARS	P54136	660 aa	Known RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	MTHFSD	Q2M296	383 aa	Known RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CCDC171	Q6TFL3	1326 aa		18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	WTAP	Q15007	396 aa		18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.78	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	NPHP4	O75161	1426 aa	Predicted RBP	18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CLCN1	P35523	988 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	PYM1	Q9BRP8	204 aa	Known RBP	18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	PIK3C2G	O75747	1445 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	ZFYVE9	O95405	1425 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	SH3TC1	Q8TE82	1336 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	USO1	O60763	962 aa	Known RBP	18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	IARS	P41252	1262 aa	Known RBP	18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	PAFAH1B1	P43034	410 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	KRT27	Q7Z3Y8	459 aa		18.77	■□□□□ 0.6
TUBGCP6-204	ENST00000439308	CERS3	Q8IU89	383 aa		18.77	■□□□□ 0.59
TUBGCP6-204	ENST00000439308	KIF4A	O95239	1232 aa		18.77	■□□□□ 0.59
TUBGCP6-204	ENST00000439308	NAA15	Q9BXJ9	866 aa	Known RBP	18.77	■□□□□ 0.59
TUBGCP6-204	ENST00000439308	DNAJC5	Q9H3Z4	198 aa		18.77	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms