RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 DPP8Q6V1X1 898 aaPredicted RBP20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 ERC1Q8IUD2 1116 aa20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 XDHP47989 1333 aa20.48■□□□□ 0.87
CTDSPL-204ENST00000435525 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
CTDSPL-204ENST00000435525 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
CTDSPL-204ENST00000435525 CEP126Q9P2H0 1117 aa20.47■□□□□ 0.87
CTDSPL-204ENST00000435525 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
CTDSPL-204ENST00000435525 MYH3P11055 1940 aa20.47■□□□□ 0.87
CTDSPL-204ENST00000435525 CHRNDQ07001 517 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 ARHGAP27Q6ZUM4 889 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 EYA3Q99504 573 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 PA2G4Q9UQ80 394 aaKnown RBP20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 PCDHB15Q9Y5E8 787 aa20.46■□□□□ 0.87
CTDSPL-204ENST00000435525 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 ATP2B4P23634 1241 aa20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 LEMD3Q9Y2U8 911 aa20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 RIPOR2Q9Y4F9 1068 aa20.45■□□□□ 0.86
CTDSPL-204ENST00000435525 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 HDAC1Q13547 482 aaPredicted RBP20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 LRRC24Q50LG9 513 aa20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 PUS3Q9BZE2 481 aaKnown RBP20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 AKAP2Q9Y2D5 859 aa20.44■□□□□ 0.86
CTDSPL-204ENST00000435525 UFL1O94874 794 aa20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 GPSM2P81274 684 aa20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 SIRT2Q8IXJ6 389 aa20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 PSMD1Q99460 953 aa20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 KIAA1551Q9HCM1 1747 aa20.43■□□□□ 0.86
CTDSPL-204ENST00000435525 YBX3P16989 372 aaKnown RBP eCLIP20.42■□□□□ 0.86
CTDSPL-204ENST00000435525 VPS33BQ9H267 617 aa20.42■□□□□ 0.86
CTDSPL-204ENST00000435525 G3V3G9 751 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 PDE8BO95263 885 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 DCAF8Q5TAQ9 597 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 KIF1BPQ96EK5 621 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 EXOC6BQ9Y2D4 811 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 LTBP3Q9NS15 1303 aa20.41■□□□□ 0.86
CTDSPL-204ENST00000435525 ZNF804BA4D1E1 1349 aa20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 IFIT1P09914 478 aaKnown RBP20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 OLFM4Q6UX06 510 aa20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 RTFDC1Q9BY42 306 aaPredicted RBP20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 ZC3H12CQ9C0D7 883 aaKnown RBP20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 DCTPP1Q9H773 170 aa20.4■□□□□ 0.86
CTDSPL-204ENST00000435525 TAF5LO75529 589 aa20.39■□□□□ 0.85
CTDSPL-204ENST00000435525 SLC5A1P13866 664 aa20.39■□□□□ 0.85
CTDSPL-204ENST00000435525 WASHC4Q2M389 1173 aa20.39■□□□□ 0.85
CTDSPL-204ENST00000435525 TBC1D16Q8TBP0 767 aa20.39■□□□□ 0.85
CTDSPL-204ENST00000435525 TFCP2Q12800 502 aa20.38■□□□□ 0.85
CTDSPL-204ENST00000435525 ATP2B3Q16720 1220 aa20.38■□□□□ 0.85
CTDSPL-204ENST00000435525 LPIN2Q92539 896 aa20.38■□□□□ 0.85
CTDSPL-204ENST00000435525 SLX4Q8IY92 1834 aa20.38■□□□□ 0.85
CTDSPL-204ENST00000435525 APBB1O00213 710 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 JDP2Q8WYK2 163 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 GPR108Q9NPR9 543 aa20.37■□□□□ 0.85
CTDSPL-204ENST00000435525 LMNB1P20700 586 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 GORABQ5T7V8 394 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 VPS37DQ86XT2 251 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 RHPN1Q8TCX5 695 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 CCDC136Q96JN2 1154 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 POLLQ9UGP5 575 aa20.36■□□□□ 0.85
CTDSPL-204ENST00000435525 NFKBIEO00221 500 aa20.35■□□□□ 0.85
CTDSPL-204ENST00000435525 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
CTDSPL-204ENST00000435525 ZNF804AQ7Z570 1209 aa20.35■□□□□ 0.85
CTDSPL-204ENST00000435525 VGLL2Q8N8G2 317 aa20.35■□□□□ 0.85
CTDSPL-204ENST00000435525 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
CTDSPL-204ENST00000435525 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 SASH1O94885 1247 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 KIAA2012Q0VF49 1180 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 NIM1KQ8IY84 436 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 NEUROD6Q96NK8 337 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 BRCA1P38398 1863 aaKnown RBP20.34■□□□□ 0.85
CTDSPL-204ENST00000435525 RIMBP2O15034 1052 aa20.33■□□□□ 0.85
CTDSPL-204ENST00000435525 RASSF7Q02833 373 aa20.33■□□□□ 0.85
CTDSPL-204ENST00000435525 C15orf52Q6ZUT6 534 aaKnown RBP20.33■□□□□ 0.85
CTDSPL-204ENST00000435525 GNL3LQ9NVN8 582 aaKnown RBP20.33■□□□□ 0.85
CTDSPL-204ENST00000435525 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 A0A1B0GUL7 405 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 AOC3Q16853 763 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 TNNI3KQ59H18 835 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms